Flexible temporal expression profile modelling using the Gaussian process

DOI10.1016/J.CSDA.2005.11.017MaRDI QIDQ1010526zbMATH OpenOpenAlexFDO

Authors Ming Yuan

Publication date 6 April 2009

Published in Computational Statistics and Data Analysis (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.csda.2005.11.017

zbMATH Keywords

Gaussian processdifferential expressiontemporal gene expression

Mathematics Subject Classification ID

Inference from stochastic processes (62M99) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Genetics and epigenetics (92D10)

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Cites work

• scientific article; zbMATH DE number 45848 (Why is no real title available?)
• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• Detecting differential gene expression with a semiparametric hierarchical mixture method
• Hidden Markov Models for Microarray Time Course Data in Multiple Biological Conditions
• Interpolation of spatial data. Some theory for kriging
• Statistical decision theory and Bayesian analysis. 2nd ed
• The analysis of gene expression data. Methods and software

Cited in

(10)

• Flexible modelling of genetic effects on function-valued traits
• An empirical Bayes change-point model for transcriptome time-course data
• scientific article; zbMATH DE number 2033336 (Why is no real title available?)
• Comments on: Optimization and data mining in medicine
• A time-series DDP for functional proteomics profiles
• Multimodal probabilistic generative models for time-course gene expression data and Gene Ontology (GO) tags
• Bayesian modeling of factorial time-course data with applications to a bone aging gene expression study
• The importance of distinct modeling strategies for gene and gene-specific treatment effects in hierarchical models for microarray data
• Profiling time course expression of virus genes -- an illustration of Bayesian inference under shape restrictions
• scientific article; zbMATH DE number 2101377 (Why is no real title available?)

Describes a project that uses

Uses Software

• EBarrays

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