HMMER
From MaRDI portal
swMATH10514MaRDI QIDQ22473FDOQ22473
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Official website: http://hmmer.org/
Cited In (only showing first 100 items - show all)
- Discovering short linear protein motif based on selective training of profile hidden Markov models
- A composite approach to protein tertiary structure prediction: hidden Markov model based on lattice
- ModEnzA: accurate identification of metabolic enzymes using function specific profile HMMs with optimised discrimination threshold and modified emission probabilities
- Skeletal muscle signal peptide optimization for enhancing propeptide or cytokine secretion
- Handbook of Hidden Markov Models in Bioinformatics
- Feature extraction by statistical contact potentials and wavelet transform for predicting subcellular localizations in gram negative bacterial proteins
- Pattern recognition methods for advanced stochastic protein sequence analysis using HMMs
- Large-Scale Multiple Sequence Alignment and Phylogeny Estimation
- Data mining techniques for the life sciences
- Denoising and recognition using hidden Markov models with observation distributions modeled by hidden Markov trees
- MIRA
- Biopython
- BIONJ
- LAGAN
- NAST
- ANNOTATOR
- ADP_EM
- ANCHOR
- DBAli tools
- DUET
- Brain
- ESpritz
- GenePattern
- ARAGORN
- HHblits
- APOLLO
- ANNIE
- LIGPLOT
- antiSMASH
- CISA
- FUNC
- MAESTRO
- CONFOLD
- NUCPLOT
- MeDor
- MetaDisorder
- HPOSim
- MOTIF-EM
- MFDp2
- IntelliGO
- dbCAN
- OBSTRUCT
- dissectHMMER
- PDB_REDO
- eggNOG
- MetaboLights
- PreDisorder
- MSEA
- PROFbval
- POODLE-I
- PrDOS
- Infernal
- SCOP2
- PredPPCrys
- HPMV
- Orione
- SFCHECK
- PhenomeNET
- Mugsy
- MetaPSICOV
- Statalign
- NNcon
- PconsFold
- Prokka
- Prodigal
- PartTree
- SUPERFAMILY
- SPINE-D
- StrBioLib
- VaZyMolO
- VNTRseek
- XANNpred
- XtalPred
- RIATA-HGT
- VelvetOptimiser
- TNT
- CUDAMPF++
- PROMALS
- BLASTZ
- EVEREST
- iGTP
- OXBench
- ProtTest 3
- UCSC genome browser
- Mauve
- ESMERALDA
- MCScanX
- PathBLAST
- EFICAz
- RNACompress
- PSLpred
- TEIRESIAS
- Mobyle
- COBALT
- FASTSP
- GapCoder
- Gegenees
- MSACompro
- POY
- SATCHMO-JS
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