HMMER
From MaRDI portal
Cited in
(only showing first 100 items - show all)- MIRA
- Skeletal muscle signal peptide optimization for enhancing propeptide or cytokine secretion
- Biopython
- BIONJ
- Feature extraction by statistical contact potentials and wavelet transform for predicting subcellular localizations in gram negative bacterial proteins
- LAGAN
- NAST
- Discovering short linear protein motif based on selective training of profile hidden Markov models
- A composite approach to protein tertiary structure prediction: hidden Markov model based on lattice
- Statalign
- ANNOTATOR
- LIGPLOT
- NUCPLOT
- DBAli tools
- SCOP2
- DUET
- MAESTRO
- PDB_REDO
- OBSTRUCT
- SFCHECK
- SUPERFAMILY
- HHblits
- MOTIF-EM
- ADP_EM
- GenePattern
- VaZyMolO
- MeDor
- MetaDisorder
- PreDisorder
- MFDp2
- PROFbval
- StrBioLib
- ESpritz
- SPINE-D
- PrDOS
- POODLE-I
- ANCHOR
- VNTRseek
- PredPPCrys
- XtalPred
- XANNpred
- FUNC
- IntelliGO
- PhenomeNET
- HPOSim
- Brain
- MSEA
- MetaboLights
- Orione
- CISA
- Mugsy
- Prokka
- Prodigal
- ARAGORN
- Infernal
- VelvetOptimiser
- CONFOLD
- APOLLO
- PconsFold
- MetaPSICOV
- NNcon
- ANNIE
- HPMV
- dissectHMMER
- antiSMASH
- dbCAN
- eggNOG
- PartTree
- RIATA-HGT
- Data mining techniques for the life sciences
- ModEnzA: accurate identification of metabolic enzymes using function specific profile HMMs with optimised discrimination threshold and modified emission probabilities
- Algorithms in computational molecular biology. Techniques approaches and applications.
- CUDAMPF++
- PROMALS
- EVEREST
- OXBench
- BLASTZ
- UCSC genome browser
- ProtTest 3
- iGTP
- Handbook of Hidden Markov Models in Bioinformatics
- Mauve
- ESMERALDA
- TNT
- MCScanX
- PathBLAST
- EFICAz
- RNACompress
- PSLpred
- Large-Scale Multiple Sequence Alignment and Phylogeny Estimation
- Bioinformatics. Volume I. Data, sequence analysis, and evolution
- TEIRESIAS
- Mobyle
- SATCHMO-JS
- SPEM
- MSACompro
- FASTSP
- COBALT
- GapCoder
- POY
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