Hierarchically clustered HMM for protein sequence motif extraction with variable length

DOI10.1109/TST.2014.6961032MaRDI QIDQ3194493zbMATH OpenOpenAlexFDO

Authors C. Hudson, Bernard Chen, Dongsheng Che

Publication date 28 October 2015

Published in Tsinghua Science and Technology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1109/tst.2014.6961032

zbMATH Keywords

bioinformaticshidden Markov modelhierarchical clusteringsequential motif

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) General biostatistics (92B15) Protein sequences, DNA sequences (92D20)

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Cited in

(2)

• Discovering short linear protein motif based on selective training of profile hidden Markov models
• Motif based sequence classification

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