Improving data locality of RNA secondary structure prediction code

DOI10.1007/978-3-319-59063-9_62MaRDI QIDQ5077578zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Marek Palkowski, Wlodzimierz Bielecki, Piotr Skotnicki

Publication date 18 May 2022

Published in Artificial Intelligence and Soft Computing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-319-59063-9_62

zbMATH Keywords

automatic loop tilingcomputational biologyNussinov algorithmRNA foldingtransitive closure

Mathematics Subject Classification ID

Software, source code, etc. for problems pertaining to biology (92-04) Computational methods for problems pertaining to biology (92-08) Protein sequences, DNA sequences (92D20)

Recommendations

• Rapid dynamic programming algorithms for RNA secondary structure
• A massively parallel genetic algorithm for RNA secondary structure prediction
• RNA secondary structures and their prediction
• An optimized and efficiently parallelized dynamic programming for RNA secondary structure prediction
• Computational Science – ICCS 2005

This page was built for publication: Improving data locality of RNA secondary structure prediction code

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5077578)