tidyestimate (Q121936)
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A Tidy Implementation of 'ESTIMATE'
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | tidyestimate |
A Tidy Implementation of 'ESTIMATE' |
Statements
21 August 2023
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The 'ESTIMATE' package infers tumor purity from expression data as a function of immune and stromal infiltrate, but requires writing of intermediate files, is un-pipeable, and performs poorly when presented with modern datasets with current gene symbols. 'tidyestimate' a fast, tidy, modern reimagination of 'ESTIMATE' (2013) <doi:10.1038/ncomms3612>.
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expanded from: GPL (≥ 2) (English)
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Kosuke Yoshihara
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Rahulsimham Vegesna
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Hoon Kim
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Roel Verhaak
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