BAMMtools (Q27203)

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Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees
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BAMMtools
Analysis and Visualization of Macroevolutionary Dynamics on Phylogenetic Trees

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    2.1.10
    15 July 2022
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    1.0.1
    7 March 2014
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    1.0
    5 March 2014
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    2.0.2
    10 July 2014
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    2.0.4
    18 March 2015
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    2.0.5
    23 March 2015
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    2.0.6
    10 September 2015
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    2.1.0
    10 November 2015
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    2.1.1
    3 March 2016
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    2.1.3
    24 May 2016
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    2.1.4
    10 June 2016
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    2.1.5
    3 October 2016
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    2.1.6
    3 February 2017
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    2.1.7
    5 December 2019
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    2.1.8
    18 October 2021
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    2.1.9
    23 April 2022
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    2.1.11
    19 December 2023
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    19 December 2023
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    Provides functions for analyzing and visualizing complex macroevolutionary dynamics on phylogenetic trees. It is a companion package to the command line program BAMM (Bayesian Analysis of Macroevolutionary Mixtures) and is entirely oriented towards the analysis, interpretation, and visualization of evolutionary rates. Functionality includes visualization of rate shifts on phylogenies, estimating evolutionary rates through time, comparing posterior distributions of evolutionary rates across clades, comparing diversification models using Bayes factors, and more.
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