scrm (Q30022)

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Simulating the Evolution of Biological Sequences
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    scrm
    Simulating the Evolution of Biological Sequences

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      1.7.4-0
      14 February 2022
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      1.3-1
      21 October 2014
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      1.3-2
      22 October 2014
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      1.3-3
      18 November 2014
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      1.5.0-1
      11 April 2015
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      1.6.0-2
      7 June 2015
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      1.7.2-0
      11 December 2016
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      1.7.2-1
      8 December 2017
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      1.7.2-3
      18 June 2018
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      1.7.2-4
      30 June 2018
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      1.7.3-1
      19 November 2018
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      1.7.5
      8 January 2024
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      8 January 2024
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      A coalescent simulator that allows the rapid simulation of biological sequences under neutral models of evolution, see Staab et al. (2015) <doi:10.1093/bioinformatics/btu861>. Different to other coalescent based simulations, it has an optional approximation parameter that allows for high accuracy while maintaining a linear run time cost for long sequences. It is optimized for simulating massive data sets as produced by Next- Generation Sequencing technologies for up to several thousand sequences.
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