longreadvqs (Q7378458)

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Viral Quasispecies Comparison from Long-Read Sequencing Data
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    longreadvqs
    Viral Quasispecies Comparison from Long-Read Sequencing Data

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      Performs variety of viral quasispecies diversity analyses [see Pamornchainavakul et al. (2026) <doi:10.1371/journal.pcbi.1014208>] based on long-read sequence alignment. Main functions include 1) sequencing error and other noise minimization and read sampling, 2) Single nucleotide variant (SNV) profiles comparison, and 3) viral quasispecies profiles comparison and visualization.
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      28 April 2026
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      PACKAGES.rds
      9 July 2026
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      0.1.2
      14 April 2024
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      0.1.3
      26 August 2024
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      0.1.4
      20 October 2025
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      0.1.5
      28 April 2026
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