tlsR (Q7378629)

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Detection and Spatial Analysis of Tertiary Lymphoid Structures
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    tlsR
    Detection and Spatial Analysis of Tertiary Lymphoid Structures

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      Fast, reproducible detection and quantitative analysis of tertiary lymphoid structures (TLS) in multiplexed tissue imaging. Implements Independent Component Analysis Trace (ICAT) index, local Ripley's K scanning, automated K Nearest Neighbor (KNN)-based TLS detection, and T-cell clusters identification as described in Amiryousefi et al. (2025) <doi:10.1101/2025.09.21.677465>.
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      23 April 2026
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      PACKAGES.rds
      9 July 2026
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      0.1.2
      18 December 2025
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      0.2.0
      9 April 2026
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      0.3.0
      23 April 2026
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