r2sbml (Q7414834)
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Read 'SBML' Models and Convert Them to Simulation Code
| Language | Label | Description | Also known as |
|---|---|---|---|
| default for all languages | No label defined |
||
| English | r2sbml |
Read 'SBML' Models and Convert Them to Simulation Code |
Statements
Reads models in the Systems Biology Markup Language ('SBML') (Hucka et al. (2003) <doi:10.1093/bioinformatics/btg015>) through the bundled 'libSBML' library (Bornstein et al. (2008) <doi:10.1093/bioinformatics/btn051>). Lists a model's species, parameters, compartments, reactions, rules, events and function definitions, and converts the model into ready-to-run simulation code for 'deSolve', 'mrgsolve', 'rxode2', 'MATLAB', 'Julia' or 'ubiquity'. Models are read, not modified.
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expanded from: GPL (≥ 2) (English)
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10 November 2026
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