The stochastic evolution of a protocell: the Gillespie algorithm in a dynamically varying volume (Q764164)
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scientific article; zbMATH DE number 6014128
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| English | The stochastic evolution of a protocell: the Gillespie algorithm in a dynamically varying volume |
scientific article; zbMATH DE number 6014128 |
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The stochastic evolution of a protocell: the Gillespie algorithm in a dynamically varying volume (English)
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13 March 2012
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Summary: We propose an improvement of the Gillespie algorithm allowing us to study the time evolution of an ensemble of chemical reactions occurring in a varying volume, whose growth is directly related to the amount of some specific molecules, belonging to the reactions set. This allows us to study the stochastic evolution of a protocell, whose volume increases because of the production of container molecules. Several protocell models are considered and compared with the deterministic models.
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0.7248424291610718
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0.69410240650177
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0.684157133102417
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0.6805304884910583
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0.6752467751502991
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