dowser (Q94583)
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B Cell Receptor Phylogenetics Toolkit
| Language | Label | Description | Also known as |
|---|---|---|---|
| English | dowser |
B Cell Receptor Phylogenetics Toolkit |
Statements
22 December 2023
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Provides a set of functions for inferring, visualizing, and analyzing B cell phylogenetic trees. Provides methods to 1) reconstruct unmutated ancestral sequences, 2) build B cell phylogenetic trees using multiple methods, 3) visualize trees with metadata at the tips, 4) reconstruct intermediate sequences, 5) detect biased ancestor-descendant relationships among metadata types Workflow examples available at documentation site (see URL). Citations: Hoehn et al (2022) <doi:10.1371/journal.pcbi.1009885>, Hoehn et al (2021) <doi:10.1101/2021.01.06.425648>.
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