| Publication | Date of Publication | Type |
|---|
Using a library of chemical reactions to fit systems of ordinary differential equations to agent-based models: a machine learning approach
(available as arXiv preprint) | N/A | Paper |
Implementation of Milstein schemes for stochastic delay-differential equations with arbitrary fixed delays
Applied Numerical Mathematics | 2026-08-24 | Paper |
A mathematical perspective on hypothesis-driven model construction: a case study in pea
Mathematical Biosciences | 2026-04-21 | Paper |
Efficient numerical computations for solving high-dimensional stochastic differential equations
Journal of Computational and Applied Mathematics | 2025-10-29 | Paper |
An in-depth study of the dynamics of Thornley's mathematical model in plant biology with a view to an improved model
Journal of Theoretical Biology | 2025-04-08 | Paper |
ANODE 2023 in honour of John Butcher's 90th birthday
Numerical Algorithms | 2024-06-21 | Paper |
Using a library of chemical reactions to fit systems of ordinary differential equations to agent-based models: a machine learning approach
Numerical Algorithms | 2024-06-21 | Paper |
A Spectrally Accurate Step-by-Step Method for the Numerical Solution of Fractional Differential Equations
Journal of Scientific Computing | 2024-04-29 | Paper |
A meshfree radial basis function method for simulation of multi‐dimensional conservation problems
Numerical Methods for Partial Differential Equations | 2023-12-12 | Paper |
Split S-ROCK methods for high-dimensional stochastic differential equations
Journal of Scientific Computing | 2023-11-16 | Paper |
Formulae for Mixed Moments of Wiener Processes and a Stochastic Area Integral
SIAM Journal on Numerical Analysis | 2023-07-18 | Paper |
The use of a time-fractional transport model for performing computational homogenisation of 2D heterogeneous media exhibiting memory effects
Journal of Computational Physics | 2023-03-13 | Paper |
| Stability switching in Lotka-Volterra and Ricker-type predator-prey systems with arbitrary step size | 2023-03-02 | Paper |
Complex-order fractional diffusion in reaction-diffusion systems
Communications in Nonlinear Science and Numerical Simulation | 2023-02-23 | Paper |
Effective numerical methods for simulating diffusion on a spherical surface in three dimensions
Numerical Algorithms | 2022-11-22 | Paper |
A new class of structure-preserving stochastic exponential Runge-Kutta integrators for stochastic differential equations
BIT | 2022-11-22 | Paper |
Homogenisation for the monodomain model in the presence of microscopic fibrotic structures
Communications in Nonlinear Science and Numerical Simulation | 2022-10-28 | Paper |
Graph-based homogenisation for modelling cardiac fibrosis
Journal of Computational Physics | 2022-05-11 | Paper |
| Pattern formation in a time fractional reaction-diffusion system | 2022-01-18 | Paper |
Localization and pseudospectra of twisted Toeplitz matrices with applications to ion channels
SIAM Journal on Matrix Analysis and Applications | 2022-01-11 | Paper |
A class of new Magnus-type methods for semi-linear non-commutative Itô stochastic differential equations
Numerical Algorithms | 2021-11-22 | Paper |
Variability in electrophysiological properties and conducting obstacles controls re-entry risk in heterogeneous ischaemic tissue
Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences | 2021-10-04 | Paper |
The reflectionless properties of Toeplitz waves and Hankel waves: an analysis via Bessel functions
Applied Mathematics and Computation | 2021-03-30 | Paper |
The use of a time-fractional transport model for performing computational homogenisation of 2D heterogeneous media exhibiting memory effects
(available as arXiv preprint) | 2021-02-04 | Paper |
A discrete least squares collocation method for two-dimensional nonlinear time-dependent partial differential equations
Journal of Computational Physics | 2021-01-26 | Paper |
An investigation of nonlinear time-fractional anomalous diffusion models for simulating transport processes in heterogeneous binary media
Communications in Nonlinear Science and Numerical Simulation | 2020-11-17 | Paper |
Exact solutions to the fractional time-space Bloch-Torrey equation for magnetic resonance imaging
Communications in Nonlinear Science and Numerical Simulation | 2020-10-14 | Paper |
Exploring synonymous codon usage preferences of disulfide-bonded and non-disulfide bonded cysteines in the \textit{E. coli} genome
Journal of Theoretical Biology | 2020-09-16 | Paper |
Bistability and switching in the lysis/lysogeny genetic regulatory network of bacteriophage
Journal of Theoretical Biology | 2020-06-03 | Paper |
On the analysis of mixed-index time fractional differential equation systems
Axioms | 2020-03-20 | Paper |
Globally simple heffter arrays \(H ( n ; k )\) when \(k \equiv 0 , 3 \pmod 4 \)
Discrete Mathematics | 2020-03-20 | Paper |
A space-fractional-reaction-diffusion model for pattern formation in coral reefs
Cogent Mathematics & Statistics | 2019-09-10 | Paper |
Efficient Multistep Methods for Tempered Fractional Calculus: Algorithms and Simulations
SIAM Journal on Scientific Computing | 2019-08-28 | Paper |
Wider contours and adaptive contours
(available as arXiv preprint) | 2019-07-02 | Paper |
Numerical solution of the time fractional reaction-diffusion equation with a moving boundary
Journal of Computational Physics | 2019-06-24 | Paper |
S-ROCK methods for stochastic delay differential equations with one fixed delay
Journal of Computational and Applied Mathematics | 2019-06-20 | Paper |
Optimal control of acute myeloid leukaemia
Journal of Theoretical Biology | 2019-04-26 | Paper |
A stable fast time-stepping method for fractional integral and derivative operators
Journal of Scientific Computing | 2018-12-13 | Paper |
A new fractional finite volume method for solving the fractional diffusion equation
Applied Mathematical Modelling | 2018-12-12 | Paper |
Efficient multistep methods for tempered fractional calculus: Algorithms and Simulations
(available as arXiv preprint) | 2018-12-03 | Paper |
A review of stochastic and delay simulation approaches in both time and space in computational cell biology
Stochastic Processes, Multiscale Modeling, and Numerical Methods for Computational Cellular Biology | 2018-11-19 | Paper |
A new class of semi-implicit methods with linear complexity for nonlinear fractional differential equations
SIAM Journal on Scientific Computing | 2018-09-26 | Paper |
| Computational modelling of cardiac ischaemia using a variable-order fractional Laplacian | 2018-09-21 | Paper |
Fractional models for the migration of biological cells in complex spatial domains
ANZIAM Journal | 2018-05-08 | Paper |
The use of a Riesz fractional differential-based approach for texture enhancement in image processing
ANZIAM Journal | 2018-05-08 | Paper |
A numerical method for the fractional FitzHugh-Nagumo monodomain model
ANZIAM Journal | 2018-05-08 | Paper |
Novel numerical methods for time-space fractional reaction diffusion equations in two dimensions
ANZIAM Journal | 2018-05-08 | Paper |
Parameter estimation for a phenomenological model of the cardiac action potential
ANZIAM Journal | 2018-05-08 | Paper |
Wider contours and adaptive contours
(available as arXiv preprint) | 2017-12-19 | Paper |
Numerical solution of time fractional diffusion systems
Applied Numerical Mathematics | 2017-08-30 | Paper |
A semi-alternating direction method for a 2-D fractional Fitzhugh-Nagumo monodomain model on an approximate irregular domain
Journal of Computational Physics | 2016-12-05 | Paper |
Modelling biochemical reaction systems by stochastic differential equations with reflection
Journal of Theoretical Biology | 2016-09-01 | Paper |
Corrigendum for ``Modelling biochemical reaction systems by stochastic differential equations with reflection''
Journal of Theoretical Biology | 2016-09-01 | Paper |
Strong Predictor-Corrector Approximation for Stochastic Delay Differential Equations
Journal of Computational Mathematics | 2016-08-10 | Paper |
Stability and convergence of an implicit numerical method for the space and time fractional Bloch-Torrey equation
Philosophical Transactions of the Royal Society of London. Series A. Mathematical, Physical and Engineering Sciences | 2016-05-30 | Paper |
Fast finite difference approximation for identifying parameters in a two-dimensional space-fractional nonlocal model with variable diffusivity coefficients
SIAM Journal on Numerical Analysis | 2016-03-30 | Paper |
An improved finite state projection algorithm for the numerical solution of the chemical master equation with applications
The ANZIAM Journal | 2016-03-23 | Paper |
An effective stepsize selection procedure for discrete simulation of biochemical reaction systems
The ANZIAM Journal | 2016-03-23 | Paper |
| Estimates of the coverage of parameter space by Latin Hypercube and Orthogonal sampling: connections between Populations of Models and Experimental Designs | 2015-10-12 | Paper |
Application of stochastic phenomenological modelling to cell-to-cell and beat-to-beat electrophysiological variability in cardiac tissue
Journal of Theoretical Biology | 2015-06-23 | Paper |
A computationally effective alternating direction method for the space and time fractional Bloch-Torrey equation in 3-D
Applied Mathematics and Computation | 2015-05-15 | Paper |
A Crank-Nicolson ADI spectral method for a two-dimensional Riesz space fractional nonlinear reaction-diffusion equation
SIAM Journal on Numerical Analysis | 2015-04-08 | Paper |
Accurate stationary densities with partitioned numerical methods for stochastic partial differential equations
Stochastic and Partial Differential Equations. Analysis and Computations | 2015-01-23 | Paper |
A stochastic exponential Euler scheme for simulation of stiff biochemical reaction systems
BIT | 2015-01-16 | Paper |
Numerical techniques for simulating a fractional mathematical model of epidermal wound healing
Journal of Applied Mathematics and Computing | 2014-08-05 | Paper |
Numerical simulation of the fractional Bloch equations
Journal of Computational and Applied Mathematics | 2014-07-23 | Paper |
Structure-preserving Runge-Kutta methods for stochastic Hamiltonian equations with additive noise
Numerical Algorithms | 2014-06-13 | Paper |
A derivative-free explicit method with order 1.0 for solving stochastic delay differential equations
Journal of Computational and Applied Mathematics | 2014-06-06 | Paper |
Numerical methods of the variable-order Rayleigh-Stokes problem for a heated generalized second grade fluid with fractional derivative
IMA Journal of Applied Mathematics | 2013-11-05 | Paper |
Numerical methods and analysis for a class of fractional advection-dispersion models
Computers & Mathematics with Applications | 2013-07-25 | Paper |
Analytical solutions for the multi-term time-fractional diffusion-wave/diffusion equations in a finite domain
Computers & Mathematics with Applications | 2013-07-25 | Paper |
Some novel techniques of parameter estimation for dynamical models in biological systems
IMA Journal of Applied Mathematics | 2013-06-13 | Paper |
Strong first order S-ROCK methods for stochastic differential equations
Journal of Computational and Applied Mathematics | 2013-01-21 | Paper |
Stable strong order 1.0 schemes for solving stochastic ordinary differential equations
BIT | 2012-11-21 | Paper |
A boundary preserving numerical algorithm for the Wright-Fisher model with mutation
BIT | 2012-07-31 | Paper |
Low rank Runge-Kutta methods, symplecticity and stochastic Hamiltonian problems with additive noise
Journal of Computational and Applied Mathematics | 2012-07-09 | Paper |
Weak second order S-ROCK methods for Stratonovich stochastic differential equations
Journal of Computational and Applied Mathematics | 2012-05-07 | Paper |
Novel techniques in parameter estimation for fractional dynamical models arising from biological systems
Computers & Mathematics with Applications | 2011-12-18 | Paper |
Numerical analysis for a variable-order nonlinear cable equation
Journal of Computational and Applied Mathematics | 2011-11-10 | Paper |
Supplement: Efficient weak second order stochastic Runge-Kutta methods for non-commutative Stratonovich stochastic differential equations
Journal of Computational and Applied Mathematics | 2011-08-02 | Paper |
| A note on the existence and uniqueness of a bounded mean-reverting prosess | 2011-03-30 | Paper |
Bayes-optimal chemotaxis
Neural Computation | 2011-03-22 | Paper |
Stochastic Modeling of Naïve T Cell Homeostasis for Competing Clonotypes via the Master Equation
Multiscale Modeling & Simulation | 2011-01-21 | Paper |
High strong order methods for non-commutative stochastic ordinary differential equation systems and the Magnus formula
Physica D | 2010-09-11 | Paper |
Stability and convergence of the difference methods for the space-time fractional advection-diffusion equation
Applied Mathematics and Computation | 2010-09-01 | Paper |
| A parallel matrix-free implementation of a Runge-Kutta code | 2010-08-19 | Paper |
Accurate Stationary Densities with Partitioned Numerical Methods for Stochastic Differential Equations
SIAM Journal on Numerical Analysis | 2010-07-13 | Paper |
An Augmented Lanczos Algorithm for the Efficient Computation of a Dot-Product of a Function of a Large Sparse Symmetric Matrix
Lecture Notes in Computer Science | 2010-06-10 | Paper |
| Spectral approximation of time windows in the solution of dissipative linear differential equations | 2010-05-25 | Paper |
Optimizing chemotaxis by measuring unbound-bound transitions
Physica D | 2010-04-21 | Paper |
Numerical method and analytical technique of the modified anomalous subdiffusion equation with a nonlinear source term
Journal of Computational and Applied Mathematics | 2009-07-17 | Paper |
Krylov and steady-state techniques for the solution of the chemical master equation for the mitogen-activated protein kinase cascade
Numerical Algorithms | 2009-06-30 | Paper |
| scientific article; zbMATH DE number 5545192 (Why is no real title available?) | 2009-04-21 | Paper |
Opportunistic timing and manipulation in Australian federal elections
European Journal of Operational Research | 2009-04-08 | Paper |
Multiscale Modeling of Chemical Kinetics via the Master Equation
Multiscale Modeling & Simulation | 2008-12-11 | Paper |
Inexact Uniformization Method for Computing Transient Distributions of Markov Chains
SIAM Journal on Scientific Computing | 2008-12-10 | Paper |
A genetic estimation algorithm for parameters of stochastic ordinary differential equations
Computational Statistics and Data Analysis | 2008-11-26 | Paper |
Effects of intrinsic and extrinsic noise can accelerate juxtacrine pattern formation
Bulletin of Mathematical Biology | 2008-09-08 | Paper |
Stochastic simulation of chemical reactions in spatially complex media
Computers & Mathematics with Applications | 2008-06-12 | Paper |
The Undirected Feedback Vertex Set Problem Has a Poly(k) Kernel
Parameterized and Exact Computation | 2008-06-03 | Paper |
