kinship2

MaRDI QIDQ36664swMATHCRANFDO

Authors Jason P Sinnwell, Terry Therneau

Last update 4 September 2025

Copyright license GNU General Public License, version 2.0, GNU General Public License, version 3.0

Software version identifier 1.9.6, PACKAGES.rds, 1.2.1, 1.3.1, 1.3.3, 1.3.7, 1.5.0, 1.5.4, 1.5.7, 1.6.0, 1.6.4, 1.8.4.1, 1.8.4, 1.8.5, 1.9.6.1, 1.9.6.2

Official website https://cran.r-project.org/web/packages/kinship2/index.html

Source code repository https://github.com/cran/kinship2

Description

Routines to handle family data with a pedigree object. The initial purpose was to create correlation structures that describe family relationships such as kinship and identity-by-descent, which can be used to model family data in mixed effects models, such as in the coxme function. Also includes a tool for pedigree drawing which is focused on producing compact layouts without intervention. Recent additions include utilities to trim the pedigree object with various criteria, and kinship for the X chromosome.

Cited in

(38)

• ElstonStewart
• fat2Lpoly
• famSKATRC
• Mega2R
• LRQMM
• BGmisc
• pedtools
• kgp
• SIMLA
• SimRVPedigree
• LCAextend
• MESS
• PBAT
• BayesMendel
• SimPed
• paramlink
• GWAF
• Two-Stage Bayesian Approach for GWAS With Known Genealogy
• pedigree
• ribd
• IdCoefs
• Pedig
• XIBD
• PedKin
• A generalized, multi-stage adjusted, latent class linear mixed model for testing genetic association
• PanelPRO
• BOADICEA
• sim1000G
• Familias
• penetrance
• FamEvent
• MasterBayes
• skater
• pedtricks
• GESE
• GENLIB
• pedgene
• Relatedness coefficients in pedigrees with inbred founders

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