Two-Stage Bayesian Approach for GWAS With Known Genealogy

DOI10.1080/10618600.2018.1483828MaRDI QIDQ3391196zbMATH OpenOpenAlexWikidataFDO

Authors Carmen Armero, Stefano Cabras, Alicia Quirós, María Eugenia Castellanos

Publication date 28 March 2022

Published in Journal of Computational and Graphical Statistics (Search for Journal in Brave)

Full work available at URL http://hdl.handle.net/10016/33675

zbMATH Keywords

model selectionBayes factorkinship coefficientGaussian Markov random fieldbeta-thalassemia disorderrobust prior distribution

Mathematics Subject Classification ID

Statistics (62-XX)

Cites work

• scientific article; zbMATH DE number 45848 (Why is no real title available?)
• scientific article; zbMATH DE number 1034042 (Why is no real title available?)
• scientific article; zbMATH DE number 1551803 (Why is no real title available?)
• scientific article; zbMATH DE number 845714 (Why is no real title available?)
• scientific article; zbMATH DE number 3048438 (Why is no real title available?)
• A Statistical View of Some Chemometrics Regression Tools
• A statistical perspective on ill-posed inverse problems (with discussion)
• Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations (with discussion)
• Bayes Factors
• Bayes and empirical-Bayes multiplicity adjustment in the variable-selection problem
• Bayesian linear regression with sparse priors
• Bayesian sparsity-path-analysis of genetic association signal using generalized \(t\) priors
• Criteria for Bayesian model choice with application to variable selection
• Flexible smoothing with \(B\)-splines and penalties. With comments and a rejoinder by the authors
• On Sampling Strategies in Bayesian Variable Selection Problems With Large Model Spaces
• Optimal predictive model selection.
• Regularization and Variable Selection Via the Elastic Net
• Scalable Bayesian variable selection using nonlocal prior densities in ultrahigh-dimensional settings
• Semiparametric Regression
• Spike and slab variable selection: frequentist and Bayesian strategies
• The Bayesian Lasso
• The Bayesian elastic net
• The spike-and-slab LASSO

Cited in

(1)

• A two‐phase Bayesian methodology for the analysis of binary phenotypes in genome‐wide association studies

Describes a project that uses

Uses Software

• R
• LearnBayes
• SemiPar
• glmnet
• plyr
• Mcmcpack
• BayesVarSel
• kinship2

This page was built for publication: Two-Stage Bayesian Approach for GWAS With Known Genealogy

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3391196)