Line geometries for sequence comparisons

DOI10.1007/BF02459504MaRDI QIDQ800250zbMATH OpenFDO

Authors Michael S. Waterman, Marcela D. Perlwitz

Publication date 1984

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

zbMATH Keywords

genetic sequencessequence comparisons

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Analysis of algorithms and problem complexity (68Q25) Dynamic programming (90C39) Physiological, cellular and medical topics (92Cxx) Line geometries and their generalizations (51M30)

Recommendations

• The Multiple Sequence Alignment Problem in Biology
• Sequence comparison with concave weighting functions
• Publication:4731046
• scientific article; zbMATH DE number 434724
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Cites work

• scientific article; zbMATH DE number 3182580 (Why is no real title available?)
• Matching Sequences under Deletion/Insertion Constraints
• Minimal Mutation Trees of Sequences
• On the Theory and Computation of Evolutionary Distances
• Some biological sequence metrics
• The String-to-String Correction Problem

Cited in

(9)

• A multiple sequence comparison method
• Application of max-plus algebra to biological sequence comparisons
• Finding similar regions in many sequences
• A survey of multiple sequence comparison methods
• Approximation algorithms for multiple sequence alignment under a fixed evolutionary tree
• A block recursive sequence alignment algorithm
• Consistency of optimal sequence alignments
• Optimal sequence alignment allowing for long gaps
• Approximation algorithms for tree alignment with a given phylogeny

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