scientific article; zbMATH DE number 434724

MaRDI QIDQ3139564zbMATH OpenFDO

Authors M. A. Roytberg

Publication date 5 June 1994

zbMATH Keywords

comparison of biopolymer sequencesmaximum weightoptimal alignmentPascal procedure

Mathematics Subject Classification ID

Discrete mathematics in relation to computer science (68R99) Computing methodologies and applications (68U99) Computational methods for problems pertaining to biology (92-08) Protein sequences, DNA sequences (92D20)

Recommendations

• Sequence comparison with concave weighting functions
• Optimal sequence alignment allowing for long gaps
• Parametric optimization of sequence alignment
• The Multiple Sequence Alignment Problem in Biology
• scientific article; zbMATH DE number 742991

Cited in

(20)

• Pattern recognition in several sequences: Consensus and alignment
• A dynamic programming algorithm to find all solutions in a neighborhood of the optimum
• Optimal sequence alignment using affine gap costs
• Using Hirschberg's algorithm to generate random alignments of strings
• Parametric optimization of sequence alignment
• Application of max-plus algebra to biological sequence comparisons
• Fast trie-based method for multiple pairwise sequence alignment
• Alignment of random walks by dynamic programming
• A block recursive sequence alignment algorithm
• scientific article; zbMATH DE number 434721 (Why is no real title available?)
• Efficient algorithms for molecular sequence analysis.
• scientific article; zbMATH DE number 45430 (Why is no real title available?)
• scientific article; zbMATH DE number 701438 (Why is no real title available?)
• scientific article; zbMATH DE number 1746434 (Why is no real title available?)
• scientific article; zbMATH DE number 742991 (Why is no real title available?)
• Tropical properties of alignment matrices
• A bit-parallel, general integer-scoring sequence alignment algorithm
• scientific article; zbMATH DE number 5171901 (Why is no real title available?)
• Optimal global alignment of signals by maximization of Pearson correlation
• Line geometries for sequence comparisons

This page was built for publication:

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q3139564)