misha

Authors Aviezer Lifshitz, Misha Hoichman, Eitan Yaffe, Amos Tanay

Last update 24 August 2026

Copyright license MIT license, File License

Software version identifier 4.2.3, 4.2.6, 4.2.8, 4.2.9, PACKAGES.rds, 4.3.6, 4.3.11, 4.3.12, 5.3.1, 5.3.2, 5.4.0, 5.4.5, 5.6.6, 5.11.23

Description

A toolkit for analysis of genomic data. The 'misha' package implements an efficient data structure for storing genomic data, and provides a set of functions for data extraction, manipulation and analysis. Some of the 2D genome algorithms were described in Yaffe and Tanay (2011) <doi:10.1038/ng.947>.

Cites work

Probabilistic modeling of Hi-C contact maps eliminates systematic biases to characterize global chromosomal architecture

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