Multi-criterion optimization for genetic network modeling

DOI10.1016/S0165-1684(02)00473-5MaRDI QIDQ947412zbMATH OpenOpenAlexFDO

Authors E. P. van Someren, E. Backer, Lodewyk F. A. Wessels, Marcel J. T. Reinders

Publication date 2 October 2008

Published in Signal Processing (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/s0165-1684(02)00473-5

zbMATH Keywords

regressionsmall sample size problemmulti-criterion optimizationreverse engineering of genetic networks

Mathematics Subject Classification ID

Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Multi-objective and goal programming (90C29) Genetics and epigenetics (92D10)

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• Modern tools for the time-discrete dynamics and optimization of gene-environment networks
• On optimization, dynamics and uncertainty: A tutorial for gene-environment networks
• Reconstruction of Kauffman networks applying trees
• A mathematical program to refine gene regulatory networks
• Sequential prediction bounds for identifying differentially expressed genes in replicated microarray experiments
• Modeling genetic networks from clonal analysis
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• Modeling of gene regulatory networks with hybrid differential evolution and particle swarm optimization

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