Multinomial event naive Bayesian modelling for SAGE data classification

DOI10.1007/S00180-007-0029-0MaRDI QIDQ2271701zbMATH OpenOpenAlexFDO

Authors Xin Jin, Wengang Zhou, Rongfang Bie

Publication date 8 August 2009

Published in Computational Statistics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s00180-007-0029-0

zbMATH Keywords

Bayes classificationk-nearest neighbors classificationserial analysis of gene expressions

Mathematics Subject Classification ID

Bayesian inference (62F15) Nonparametric hypothesis testing (62G10) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40)

Review text

Different approaches to classification of serial analyses of gene expression (SAGE) data are compared on real data of human cancerous tissues (brain and breast). SAGE measures expression levels of different genes in a tissue. Naive Bayes classification based on the multinomial event model and \(k\)-nearest neighbours classification with information distance and Wilcoxon rank sum test are discussed. The authors' conclusion is that the Bayesian approach is promising for accurate classification of SAGE data and is more efficient than \(k\)-NN classification.

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Cites work

• Gene selection for cancer classification using support vector machines
• scientific article; zbMATH DE number 107482 (Why is no real title available?)

Cited in

(1)

• Prediction of recurrent events in breast cancer using the naive Bayesian classification

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