Multiple hypothesis testing with persistent homology
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Abstract: In this paper we propose a computationally efficient multiple hypothesis testing procedure for persistent homology. The computational efficiency of our procedure is based on the observation that one can empirically simulate a null distribution that is universal across many hypothesis testing applications involving persistence homology. Our observation suggests that one can simulate the null distribution efficiently based on a small number of summaries of the collected data and use this null in the same way that p-value tables were used in classical statistics. To illustrate the efficiency and utility of the null distribution we provide procedures for rejecting acyclicity with both control of the Family-Wise Error Rate (FWER) and the False Discovery Rate (FDR). We will argue that the empirical null we propose is very general conditional on a few summaries of the data based on simulations and limit theorems for persistent homology for point processes.
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Cites work
- scientific article; zbMATH DE number 3624650 (Why is no real title available?)
- scientific article; zbMATH DE number 2103273 (Why is no real title available?)
- scientific article; zbMATH DE number 3060290 (Why is no real title available?)
- A sharper Bonferroni procedure for multiple tests of significance
- Certified mapper: repeated testing for acyclicity and obstructions to the nerve lemma
- Controlling the familywise error rate in functional neuroimaging: a comparative review
- Extending hypothesis testing with persistent homology to three or more groups
- Finding the edge of a Poisson forest
- Fréchet means for distributions of persistence diagrams
- Homological Percolation: The Formation of Giant k-Cycles
- Hypothesis testing for topological data analysis
- LEAST-SQUARES ESTIMATION OF LOCATION AND SCALE PARAMETERS USING ORDER STATISTICS
- Limit theorems for persistence diagrams
- Medians of populations of persistence diagrams
- On the estimation of a convex set
- Permutation \(p\)-values should never be zero: calculating exact \(p\)-values when permutations are randomly drawn
- Probabilistic Fréchet means for time varying persistence diagrams
- Probability measures on the space of persistence diagrams
- Ripser: efficient computation of Vietoris-Rips persistence barcodes
- Robust statistics, hypothesis testing, and confidence intervals for persistent homology on metric measure spaces
- Robust topological inference: distance to a measure and kernel distance
- Statistical topological data analysis using persistence landscapes
- Stochastic convergence of persistence landscapes and silhouettes
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