Statistical topological data analysis using persistence landscapes
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Publication:5502108
zbMATH Open1337.68221arXiv1207.6437MaRDI QIDQ5502108FDOQ5502108
Authors: Peter Bubenik 
Publication date: 17 August 2015
Abstract: We define a new topological summary for data that we call the persistence landscape. Since this summary lies in a vector space, it is easy to combine with tools from statistics and machine learning, in contrast to the standard topological summaries. Viewed as a random variable with values in a Banach space, this summary obeys a strong law of large numbers and a central limit theorem. We show how a number of standard statistical tests can be used for statistical inference using this summary. We also prove that this summary is stable and that it can be used to provide lower bounds for the bottleneck and Wasserstein distances.
Full work available at URL: https://arxiv.org/abs/1207.6437
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persistent homologytopological data analysispersistence landscapestatistical topologytopological summary
Learning and adaptive systems in artificial intelligence (68T05) Other homology theories in algebraic topology (55N35) Nonparametric inference (62G99) Computer graphics; computational geometry (digital and algorithmic aspects) (68U05)
Cited In (only showing first 100 items - show all)
- Persistent Homology of Geospatial Data: A Case Study with Voting
- Topological features of multivariate distributions: dependency on the covariance matrix
- Describing topology on the set of persistence diagrams
- Correspondence modules and persistence sheaves: a unifying perspective on one-parameter persistent homology
- The fiber of persistent homology for simplicial complexes
- Persistent Homology: A Topological Tool for Higher-Interaction Systems
- The Accumulated Persistence Function, a New Useful Functional Summary Statistic for Topological Data Analysis, With a View to Brain Artery Trees and Spatial Point Process Applications
- Event history and topological data analysis
- Bayesian topological signal processing
- Testing goodness of fit for point processes via topological data analysis
- Learning representations of persistence barcodes
- Statistical topology and the random interstellar medium
- Topological data analysis in information space
- Persistence landscapes of affine fractals
- Capturing dynamics of time-varying data via topology
- Aspects of topological approaches for data science
- ANAPT: additive noise analysis for persistence thresholding
- What Are Higher-Order Networks?
- Persistent homology detects curvature
- A framework for differential calculus on persistence barcodes
- Parameter estimation in systems exhibiting spatially complex solutions via persistent homology and machine learning
- Stable volumes for persistent homology
- Topological data analysis and its usefulness for precision medicine studies
- A topological data analysis approach on predicting phenotypes from gene expression data
- Using discrete Ricci curvatures to infer COVID-19 epidemic network fragility and systemic risk
- The persistence landscape and some of its properties
- Measuring the error in approximating the sub-level set topology of sampled scalar data
- Functional summaries of persistence diagrams
- Comparison of persistence diagrams
- Generalized cluster trees and singular measures
- Same but different: distance correlations between topological summaries
- Bootstrapping persistent Betti numbers and other stabilizing statistics
- Expected invariants of simplicial complexes obtained from random point samples
- Nonparametric estimation of probability density functions of random persistence diagrams
- A Bayesian framework for persistent homology
- Stabilizing the unstable output of persistent homology computations
- Topological data analysis approaches to uncovering the timing of ring structure onset in filamentous networks
- Topological data analysis of noise: uniform unimodal distributions
- Geometric metrics for topological representations
- Topological object data analysis methods with an application to medical imaging
- A stable cardinality distance for topological classification
- A new non-Archimedean metric on persistent homology
- Biomolecular topology: modelling and analysis
- Challenges in topological object data analysis
- Topological recognition of critical transitions in time series of cryptocurrencies
- Investigation of flash crash via topological data analysis
- Geometric and probabilistic limit theorems in topological data analysis
- Continuation of point clouds via persistence diagrams
- Exploring uses of persistent homology for statistical analysis of landmark-based shape data
- On topological analysis of cells organization in biological images
- Tropical coordinates on the space of persistence barcodes
- Fractal dimension estimation with persistent homology: a comparative study
- A differential geometric approach to time series forecasting
- Topological Data Analysis of Clostridioides difficile Infection and Fecal Microbiota Transplantation
- Tropical sufficient statistics for persistent homology
- Persistence diagrams with linear machine learning models
- Topological microstructure analysis using persistence landscapes
- Limit theorems for Betti numbers of extreme sample clouds with application to persistence barcodes
- Graded persistence diagrams and persistence landscapes
- A statistical approach to persistent homology
- Topological data analysis for the string landscape
- Homotopical decompositions of simplicial and Vietoris Rips complexes
- Topological data analysis of single-trial electroencephalographic signals
- A topological analysis of targeted In-111 uptake in SPECT images of murine tumors
- The density of expected persistence diagrams and its kernel based estimation
- On the expectation of a persistence diagram by the persistence weighted kernel
- Topological machine learning with persistence indicator functions
- Principal component analysis of persistent homology rank functions with case studies of spatial point patterns, sphere packing and colloids
- Interactions between kernels, frames, and persistent homology
- Convergence rates for persistence diagram estimation in topological data analysis
- Topological data analysis with Bregman divergences
- Prediction in cancer genomics using topological signatures and machine learning
- Topological data analysis of financial time series: landscapes of crashes
- Modelling persistence diagrams with planar point processes, and revealing topology with bagplots
- On the choice of weight functions for linear representations of persistence diagrams
- Topological adventures in neuroscience
- Using persistent homology and dynamical distances to analyze protein binding
- Data analysis from empirical moments and the Christoffel function
- Statistical topology via Morse theory, persistence and nonparametric estimation
- Persistence Terrace for Topological Inference of Point Cloud Data
- Multiscale persistent topological descriptor for porous structure retrieval
- Evolutionary homology on coupled dynamical systems with applications to protein flexibility analysis
- Multiscale geometric feature extraction for high-dimensional and non-Euclidean data with applications
- Numeric invariants from multidimensional persistence
- Computational tools in weighted persistent homology
- Topological spaces of persistence modules and their properties
- Persistence and the Sheaf-Function Correspondence
- A new entropy based summary function for topological data analysis
- On limit theorems for persistent Betti numbers from dependent data
- Signal classification with a point process distance on the space of persistence diagrams
- Hypothesis testing for topological data analysis
- Topological data analysis for the energy and stability of endohedral metallofullerenes
- Multiparameter Persistence Landscapes
- Stochastic convergence of persistence landscapes and silhouettes
- A persistence landscapes toolbox for topological statistics
- Robust statistics, hypothesis testing, and confidence intervals for persistent homology on metric measure spaces
- Kernel method for persistence diagrams via kernel embedding and weight factor
- On the topological data analysis extensions and comparisons
- Higher interpolation and extension for persistence modules
- Stochastic convergence of persistence landscapes and silhouettes
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