outbreaker2

MaRDI QIDQ1352408swMATHCRANFDO

Authors Finlay Campbell, Rich Fitzjohn, Thibaut Jombart

Last update 23 May 2022

Copyright license MIT license, File License

Software version identifier 1.1.3

Official website https://cran.r-project.org/web/packages/outbreaker2/index.html

Source code repository https://github.com/cran/outbreaker2

Cites work

• Bayesian inference of transmission chains using timing of symptoms, pathogen genomes and contact data
• Bayesian Reconstruction of Disease Outbreaks by Combining Epidemiologic and Genomic Data

Cited in

(4)

• o2geosocial
• InfectionTrees
• RcppAlgos
• Branching Process Models to Identify Risk Factors for Infectious Disease Transmission

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