Parametric and Nonparametric FDR Estimation Revisited

DOI10.1111/J.1541-0420.2006.00531.XMaRDI QIDQ3436516zbMATH OpenOpenAlexWikidataFDO

Authors Baolin Wu, Zhong Guan, Hongyu Zhao

Publication date 11 May 2007

Published in Biometrics (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1111/j.1541-0420.2006.00531.x

zbMATH Keywords

leukemia gene expression datamicroarraymultiple comparisonsmultiple hypothesis testingsimultaneous inference

Mathematics Subject Classification ID

Empirical decision procedures; empirical Bayes procedures (62C12) Parametric hypothesis testing (62F03) Nonparametric hypothesis testing (62G10) Paired and multiple comparisons; multiple testing (62J15) Applications of statistics to biology and medical sciences; meta analysis (62P10)

Recommendations

• Simple estimators of false discovery rates given as few as one or two \(p\)-values without strong parametric assumptions
• scientific article; zbMATH DE number 5361937
• Improved Estimation of the Noncentrality Parameter Distribution from a Large Number of t‐Statistics, with Applications to False Discovery Rate Estimation in Microarray Data Analysis
• Maximum likelihood estimation of false discovery rate under independence
• A note on estimating the false discovery rate under mixture model

Cites work

• A Direct Approach to False Discovery Rates
• COBS: qualitatively constrained smoothing via linear programming
• Comparison of Discrimination Methods for the Classification of Tumors Using Gene Expression Data
• Empirical Bayes Analysis of a Microarray Experiment
• scientific article; zbMATH DE number 3567782 (Why is no real title available?)
• scientific article; zbMATH DE number 720689 (Why is no real title available?)
• IX. On the problem of the most efficient tests of statistical hypotheses
• Model-Based Clustering, Discriminant Analysis, and Density Estimation
• On the Identifiability of Finite Mixtures
• Resampling-based multiple testing for microarray data analysis (With comments)
• Robbins, empirical Bayes and microarrays
• Strong Control, Conservative Point Estimation and Simultaneous Conservative Consistency of False Discovery Rates: A Unified Approach
• The control of the false discovery rate in multiple testing under dependency.

Cited in

(5)

• Estimating large covariance matrix with network topology for high-dimensional biomedical data
• Unsupervised empirical Bayesian multiple testing with external covariates
• Estimating the proportion of true null hypotheses in nonparametric exponential mixture model with appication to the leukemia gene expression data
• Improved Estimation of the Noncentrality Parameter Distribution from a Large Number of t‐Statistics, with Applications to False Discovery Rate Estimation in Microarray Data Analysis
• Estimating the proportion of true null hypotheses using the pattern of observed \(p\)-values

Describes a project that uses

Uses Software

• COBS

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