Pattern matching and pattern discovery algorithms for protein topologies

DOI10.1007/3-540-44696-6_8MaRDI QIDQ4801142zbMATH OpenOpenAlexFDO

Authors Juris Vīksna, David Gilbert

Publication date 6 April 2003

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL http://bura.brunel.ac.uk/handle/2438/3002

Mathematics Subject Classification ID

Applications of graph theory (05C90) Biochemistry, molecular biology (92C40)

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(8)

• A novel algorithm for macromolecular epitope matching
• Comparison of TOPS strings based on LZ complexity
• Revisiting chameleon sequences in the protein data bank
• Extracting constrained 2-interval subsets in 2-interval sets
• Computation and visualization of protein topology graphs including ligand information
• Directed Graph Pattern Matching and Topological Embedding
• scientific article; zbMATH DE number 5008422 (Why is no real title available?)
• Identifying structural motifs in proteins

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