Jens Stoye

Available identifiers

zbMath Open stoye.jensDBLP72/3506WikidataQ89498719 ScholiaQ89498719MaRDI QIDQ235723

List of research outcomes

Publication	Date of Publication	Type
A linear time algorithm for an extended version of the breakpoint double distance	2024-08-13	Paper
On the class of double distance problems	2023-12-12	Paper
Computing the Rearrangement Distance of Natural Genomes	2022-10-14	Paper
Finding all maximal perfect haplotype blocks in linear time	2022-07-27	Paper
Can we replace reads by numeric signatures? Lyndon fingerprints as representations of sequencing reads for machine learning	2021-12-21	Paper
The Potential of Family-Free Genome Comparison	2021-06-10	Paper
The Genesis of the DCJ Formula	2021-06-10	Paper
Searching and inferring colorful topological motifs in vertex-colored graphs	2020-07-29	Paper
Fast and Simple Jumbled Indexing for Binary Run-Length Encoded Strings	2020-05-25	Paper
A linear time approximation algorithm for the DCJ distance for genomes with bounded number of duplicates	2018-03-23	Paper
Dynamic alignment-free and reference-free read compression	2018-03-22	Paper
Bloom Filter Trie – A Data Structure for Pan-Genome Storage	2017-07-25	Paper
New Genome Similarity Measures Based on Conserved Gene Adjacencies	2016-06-22	Paper
Common intervals of multiple permutations	2011-05-10	Paper
On the Similarity of Sets of Permutations and Its Applications to Genome Comparison	2011-03-18	Paper
Balanced vertices in trees and a simpler algorithm to compute the genomic distance	2010-11-19	Paper
Indexing and Searching a Mass Spectrometry Database	2010-05-04	Paper
A new linear time algorithm to compute the genomic distance via the double cut and join distance	2009-11-18	Paper
Counting suffix arrays and strings	2008-07-10	Paper
HP Distance Via Double Cut and Join Distance	2008-06-17	Paper
https://portal.mardi4nfdi.de/entity/Q5471628	2006-06-14	Paper
Research in Computational Molecular Biology	2005-11-23	Paper
Research in Computational Molecular Biology	2005-11-23	Paper
Combinatorial Pattern Matching	2005-09-07	Paper
https://portal.mardi4nfdi.de/entity/Q3024804	2005-07-04	Paper
Linear time algorithms for finding and representing all the tandem repeats in a string	2005-02-23	Paper
Algorithmic complexity of protein identification: Combinatorics of weighted strings	2004-02-14	Paper
Algorithms for Finding Gene Clusters	2003-04-06	Paper
https://portal.mardi4nfdi.de/entity/Q4547751	2002-08-21	Paper
Simple and flexible detection of contiguous repeats using a suffix tree	2002-03-03	Paper

Research outcomes over time

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