Balanced vertices in trees and a simpler algorithm to compute the genomic distance

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Publication:607155

DOI10.1016/J.AML.2010.08.021zbMATH Open1213.05243arXiv1004.2735OpenAlexW1975475150MaRDI QIDQ607155FDOQ607155


Authors: Péter L. Erdős, Lajos Soukup, Jens Stoye Edit this on Wikidata


Publication date: 19 November 2010

Published in: Applied Mathematics Letters (Search for Journal in Brave)

Abstract: This paper provides a short and transparent solution for the covering cost of white-grey trees which play a crucial role in the algorithm of Bergeron {it et al.} to compute the rearrangement distance between two multichromosomal genomes in linear time ({it Theor. Comput. Sci.}, 410:5300-5316, 2009). In the process it introduces a new {em center} notion for trees, which seems to be interesting on its own.


Full work available at URL: https://arxiv.org/abs/1004.2735




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