| Publication | Date of Publication | Type |
|---|
Dynamically equivalent disjunctive networks
Theoretical Computer Science | 2024-12-12 | Paper |
| Dividing permutations in the semiring of functional digraphs | 2024-11-13 | Paper |
Linear cuts in Boolean networks
Natural Computing | 2024-02-09 | Paper |
Interaction graphs of isomorphic automata networks. I: Complete digraph and minimum in-degree
Journal of Computer and System Sciences | 2023-08-21 | Paper |
On Fixable Families of Boolean Networks
Developments in Language Theory | 2023-06-30 | Paper |
Synchronizing Boolean networks asynchronously
Journal of Computer and System Sciences | 2023-06-12 | Paper |
Attractor separation and signed cycles in asynchronous Boolean networks
Theoretical Computer Science | 2023-02-01 | Paper |
| From additive flowers to additive automata networks | 2022-10-25 | Paper |
Attractor separation and signed cycles in asynchronous Boolean networks
(available as arXiv preprint) | 2022-06-23 | Paper |
Complexity of fixed point counting problems in Boolean networks
Journal of Computer and System Sciences | 2022-03-29 | Paper |
| Isomorphic Boolean networks and dense interaction graphs | 2021-05-05 | Paper |
Fixing monotone Boolean networks asynchronously
Information and Computation | 2020-09-17 | Paper |
Fixing monotone Boolean networks asynchronously
Information and Computation | 2020-09-17 | Paper |
Application of formal methods to biological regulatory networks: extending Thomas' asynchronous logical approach with temporal logic
Journal of Theoretical Biology | 2020-06-15 | Paper |
| Complexity of maximum fixed point problem in Boolean networks | 2020-05-12 | Paper |
Nilpotent dynamics on signed interaction graphs and weak converses of Thomas' rules
Discrete Applied Mathematics | 2019-09-05 | Paper |
A genetically modified Hoare logic
Theoretical Computer Science | 2019-06-18 | Paper |
Positive and negative cycles in Boolean networks
Journal of Theoretical Biology | 2019-02-06 | Paper |
Modeling and analysis of gene regulatory networks
Modeling in Computational Biology and Biomedicine | 2018-11-13 | Paper |
Asynchronous simulation of Boolean networks by monotone Boolean networks
Lecture Notes in Computer Science | 2018-07-06 | Paper |
Fixed points and connections between positive and negative cycles in Boolean networks
Discrete Applied Mathematics | 2018-05-24 | Paper |
Number of fixed points and disjoint cycles in monotone Boolean networks
SIAM Journal on Discrete Mathematics | 2017-08-18 | Paper |
Fixed points in conjunctive networks and maximal independent sets in graph contractions
Journal of Computer and System Sciences | 2017-06-30 | Paper |
Reduction and Fixed Points of Boolean Networks and Linear Network Coding Solvability
IEEE Transactions on Information Theory | 2017-04-28 | Paper |
Simple dynamics on graphs
Theoretical Computer Science | 2016-04-13 | Paper |
Fixed points of Boolean networks, guessing graphs, and coding theory
SIAM Journal on Discrete Mathematics | 2015-12-04 | Paper |
Fixed points of Boolean networks, guessing graphs, and coding theory
SIAM Journal on Discrete Mathematics | 2015-12-04 | Paper |
| A fixed point theorem for Boolean networks expressed in terms of forbidden subnetworks | 2015-11-02 | Paper |
Fixed point theorems for Boolean networks expressed in terms of forbidden subnetworks
Theoretical Computer Science | 2015-04-29 | Paper |
Erratum to: ``Stable periodicity and negative circuits in differential systems
Journal of Mathematical Biology | 2015-02-23 | Paper |
Maximum number of fixed points in AND-OR-NOT networks
Journal of Computer and System Sciences | 2014-06-10 | Paper |
Static Analysis of Boolean Networks Based on Interaction Graphs: A Survey
Electronic Notes in Theoretical Computer Science | 2014-03-21 | Paper |
On circuit functionality in Boolean networks
Bulletin of Mathematical Biology | 2013-10-11 | Paper |
On the convergence of Boolean automata networks without negative cycles
Cellular Automata and Discrete Complex Systems | 2013-10-10 | Paper |
Embedding of biological regulatory networks and property preservation
Mathematics in Computer Science | 2013-08-23 | Paper |
From kernels in directed graphs to fixed points and negative cycles in Boolean networks
Discrete Applied Mathematics | 2013-04-25 | Paper |
Stable periodicity and negative circuits in differential systems
Journal of Mathematical Biology | 2012-02-09 | Paper |
On the link between strongly connected iteration graphs and chaotic Boolean discrete-time dynamical systems
Fundamentals of Computation Theory | 2011-08-19 | Paper |
Local negative circuits and fixed points in non-expansive Boolean networks
Discrete Applied Mathematics | 2011-08-10 | Paper |
Topological fixed points in Boolean networks
Comptes Rendus. Mathématique. Académie des Sciences, Paris | 2010-09-06 | Paper |
Positive circuits and maximal number of fixed points in discrete dynamical systems
Discrete Applied Mathematics | 2010-04-28 | Paper |
Negative circuits and sustained oscillations in asynchronous automata networks
Advances in Applied Mathematics | 2010-04-01 | Paper |
Delays in Biological Regulatory Networks (BRN)
Computational Science – ICCS 2006 | 2008-12-09 | Paper |
An extension of a combinatorial fixed point theorem of Shih and Dong
Advances in Applied Mathematics | 2008-11-06 | Paper |
Necessary conditions for multistationarity in discrete dynamical systems
Discrete Applied Mathematics | 2007-11-30 | Paper |
| R. Thomas' modeling of biological regulatory networks: Introduction of singular states in the qualitative dynamics | 2006-06-19 | Paper |
Computational Methods in Systems Biology
Lecture Notes in Computer Science | 2005-12-23 | Paper |
Asynchronous dynamics of isomorphic Boolean networks
(available as arXiv preprint) | N/A | Paper |
