Simone Linz

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List of research outcomes

This list is not complete and representing at the moment only items from zbMATH Open and arXiv. We are working on additional sources - please check back here soon!

PublicationDate of PublicationType
Order-dependent dissimilarity measures on phylogenetic trees
Journal of Mathematical Biology
2026-03-31Paper
Cherry picking in forests: a new characterization for the unrooted hybrid number of two phylogenetic trees
Discrete Mathematics and Theoretical Computer Science. DMTCS
2026-01-13Paper
Bounding the SNPR distance between two tree-child networks using generalised agreement forests
The Electronic Journal of Combinatorics
2025-09-25Paper
Phylogenetic trees defined by at most three characters
The Electronic Journal of Combinatorics
2025-01-27Paper
On the existence of funneled orientations for classes of rooted phylogenetic networks
Theoretical Computer Science
2024-12-12Paper
On the complexity of parameterized local search for the maximum parsimony problem2024-10-21Paper
Bounding the softwired parsimony score of a phylogenetic network
Bulletin of Mathematical Biology
2024-10-11Paper
Deep kernelization for the tree bisection and reconnection (TBR) distance in phylogenetics
Journal of Computer and System Sciences
2024-03-11Paper
Phylogenetic trees defined by at most three characters2023-11-15Paper
Hypercubes and Hamilton cycles of display sets of rooted phylogenetic networks
Advances in Applied Mathematics
2023-10-30Paper
Exploring spaces of semi-directed level-1 networks
Journal of Mathematical Biology
2023-10-26Paper
A QUBO formulation for the tree containment problem
Theoretical Computer Science
2023-04-20Paper
Cyclic generators and an improved linear kernel for the rooted subtree prune and regraft distance
Information Processing Letters
2023-01-30Paper
Non-essential arcs in phylogenetic networks
Journal of Computer and System Sciences
2022-05-16Paper
On the Maximum Agreement Subtree Conjecture for Balanced Trees
SIAM Journal on Discrete Mathematics
2022-02-09Paper
Reflections on kernelizing and computing unrooted agreement forests
Annals of Operations Research
2022-01-20Paper
Non-essential arcs in phylogenetic networks
(available as arXiv preprint)
2021-07-16Paper
The rigid hybrid number for two phylogenetic trees
Journal of Mathematical Biology
2021-04-08Paper
Display sets of normal and tree-child networks
The Electronic Journal of Combinatorics
2021-01-29Paper
New reduction rules for the tree bisection and reconnection distance
Annals of Combinatorics
2020-11-07Paper
Caterpillars on three and four leaves are sufficient to binary normal networks
Journal of Mathematical Biology
2020-10-16Paper
Placing quantified variants of 3-SAT and \textsc{not-all-equal} 3-SAT in the polynomial hierarchy
Theoretical Computer Science
2020-05-23Paper
Displaying trees across two phylogenetic networks
Theoretical Computer Science
2019-11-13Paper
A tight kernel for computing the tree bisection and reconnection distance between two phylogenetic trees
SIAM Journal on Discrete Mathematics
2019-09-06Paper
Deciding the existence of a cherry-picking sequence is hard on two trees
Discrete Applied Mathematics
2019-05-03Paper
Deciding the existence of a cherry-picking sequence is hard on two trees
Discrete Applied Mathematics
2019-05-03Paper
On the subnet prune and regraft distance
The Electronic Journal of Combinatorics
2019-04-30Paper
On the subnet prune and regraft distance
The Electronic Journal of Combinatorics
2019-04-30Paper
Attaching leaves and picking cherries to characterise the hybridisation number for a set of phylogenies
Advances in Applied Mathematics
2019-03-29Paper
Identifying a species tree subject to random lateral gene transfer
Journal of Theoretical Biology
2019-02-04Paper
On the existence of a cherry-picking sequence
Theoretical Computer Science
2018-02-06Paper
Lost in space? Generalising subtree prune and regraft to spaces of phylogenetic networks
Journal of Theoretical Biology
2017-09-12Paper
On the quirks of maximum parsimony and likelihood on phylogenetic networks
Journal of Theoretical Biology
2017-08-24Paper
Spaces of phylogenetic networks from generalized nearest-neighbor interchange operations
Journal of Mathematical Biology
2016-02-18Paper
Satisfying ternary permutation constraints by multiple linear orders or phylogenetic trees
Theoretical Computer Science
2015-12-08Paper
Phylogenetic networks that display a tree twice
Bulletin of Mathematical Biology
2015-01-16Paper
A quadratic kernel for computing the hybridization number of multiple trees
Information Processing Letters
2014-05-26Paper
Optimizing tree and character compatibility across several phylogenetic trees
Theoretical Computer Science
2014-01-13Paper
Cherry picking: a characterization of the temporal hybridization number for a set of phylogenies
Bulletin of Mathematical Biology
2013-11-25Paper
Counting trees in a phylogenetic network is \#P-complete
SIAM Journal on Computing
2013-11-14Paper
On the complexity of computing the temporal hybridization number for two phylogenies
Discrete Applied Mathematics
2013-04-25Paper
Cycle Killer...Qu'est-ce que c'est? On the Comparative Approximability of Hybridization Number and Directed Feedback Vertex Set
SIAM Journal on Discrete Mathematics
2013-04-09Paper
A cluster reduction for computing the subtree distance between phylogenies
Annals of Combinatorics
2012-01-24Paper
Analyzing and reconstructing reticulation networks under timing constraints
Journal of Mathematical Biology
2010-11-11Paper
Cherry picking in forests: A new characterization for the unrooted hybrid number of two phylogenetic trees
(available as arXiv preprint)
N/APaper


Research outcomes over time


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