Phylogenetic networks that display a tree twice

DOI10.1007/S11538-014-0032-XzbMATH Open1330.92085OpenAlexW1972621850WikidataQ46835356 ScholiaQ46835356MaRDI QIDQ486637FDOQ486637

Authors: Paul Cordue, Simone Linz, Charles Semple 

Publication date: 16 January 2015

Published in: Bulletin of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: http://hdl.handle.net/10092/12864

Recommendations

• Displaying trees across two phylogenetic networks
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• The space of tree-based phylogenetic networks
• Phylogenetic Networks: Properties and Relationship to Trees and Clusters

zbMATH Keywords

phylogenetic treephylogenetic networkdisplayingtree-childtree-pathtree-sibling

Mathematics Subject Classification ID

Applications of graph theory (05C90) Genetics and epigenetics (92D10) Problems related to evolution (92D15) Trees (05C05)

Cites Work

• Introduction to algorithms
• Locating a tree in a phylogenetic network
• Seeing the trees and their branches in the network is hard
• Counting phylogenetic networks
• Properties of normal phylogenetic networks
• Counting trees in a phylogenetic network is \#P-complete

Cited In (14)

• When is a phylogenetic network simply an amalgamation of two trees?
• Tree-like reticulation networks -- when do tree-like distances also support reticulate evolution?
• Non-essential arcs in phylogenetic networks
• Classes of explicit phylogenetic networks and their biological and mathematical significance
• Display sets of normal and tree-child networks
• A decomposition theorem and two algorithms for reticulation-visible networks
• Solving the tree containment problem in linear time for nearly stable phylogenetic networks
• Tree-child cluster networks
• Computational Science – ICCS 2005
• Phylogenetic Networks: Properties and Relationship to Trees and Clusters
• Do branch lengths help to locate a tree in a phylogenetic network?
• The SNPR neighbourhood of tree-child networks
• Counting Phylogenetic Networks with Few Reticulation Vertices: Tree-Child and Normal Networks
• Modelling reticulate evolution

Uses Software

• PhyloNetwork

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