phangorn

MaRDI QIDQ20321swMATHCRANFDO

Authors Klaus Schliep, Emmanuel Paradis, Leonardo de Oliveira Martins, Iris Bardel-kahr, Alastair Potts

Last update 23 January 2023

Copyright license GNU General Public License, version 2.0, GNU General Public License, version 3.0

Software version identifier 2.11.1

Official website http://cran.r-project.org/web/packages/phangorn/index.html

Source code repository https://github.com/cran/phangorn

Cited in

(68)

• dispRity
• OUwie
• pcmabc
• microbial
• EnvNJ
• MonoPhy
• Rphylip
• recluster
• markophylo
• BSS
• apex
• STraTUS
• haplotypes
• ips
• datelife
• ape
• SeqinR
• LASER
• Clustal
• Bayesian-weighted triplet and quartet methods for species tree inference
• Registering the evolutionary history in individual-based models of speciation
• phytools
• Modeling rate of adaptive trait evolution using Cox-Ingersoll-Ross process: an approximate Bayesian computation approach
• Consistency and convergence rate of phylogenetic inference via regularization
• BEAST
• corHMM
• rwty
• Rankcluster
• dendextend
• TreeSim
• Prokka
• TOPD/FMTS
• Analysis of phylogenetics and evolution with R
• taxize
• Uncertainty in Phylogenetic Tree Estimates
• Partitionfinder
• DensiTree
• Tracer
• treespace
• RecordLinkage
• qPR
• Treevo
• stringdist
• TERA
• OUOUCIR
• MSCquartets
• On the Maximum Agreement Subtree Conjecture for Balanced Trees
• genBaRcode
• scistreer
• DADA2
• TML
• LDM
• TreeDist
• windex
• DCLEAR
• paleotree
• hisse
• rapidphylo
• babette
• beastier
• nodeSub
• pirouette
• immunarch
• POMS
• phyloregion
• dowser
• liayson
• sketching

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