A nearest-neighbor based nonparametric test for viral remodeling in heterogeneous single-cell proteomic data

DOI10.1214/20-AOAS1362zbMath1498.62192arXiv2003.02937OpenAlexW3115253950MaRDI QIDQ122052

Gourab Mukherjee, Trambak Banerjee, Bhaswar Bhattacharya, Trambak Banerjee, Gourab Mukherjee, Bhaswar B. Bhattacharya

Publication date: 1 December 2020

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/2003.02937

zbMATH Keywords

immunologynearest neighborsHIV infectiontwo-sample testshomogeneous Poisson processmass cytometrysingle-cell virologyviral remodeling

Mathematics Subject Classification ID

Nonparametric hypothesis testing (62G10) Asymptotic properties of nonparametric inference (62G20) Applications of statistics to biology and medical sciences; meta analysis (62P10) Hypothesis testing in multivariate analysis (62H15)

Related Items (1)

truh

Uses Software

• t-SNE
• lcmix
• gTests

Cites Work

• Unnamed Item
• Unnamed Item
• Unnamed Item
• Classification in general finite dimensional spaces with the \(k\)-nearest neighbor rule
• Optimal weighted nearest neighbour classifiers
• Rate of strong uniform convergence of k-NN density estimates
• Über die Anzahl von Zufallspunkten mit typ-gleichem nächsten Nachbarn und einen multivariaten Zwei-Stichproben-Test
• Sample estimate of the entropy of a random vector
• Multivariate generalizations of the Wald-Wolfowitz and Smirnov two-sample tests
• Multivariate k-nearest neighbor density estimates
• On a new multivariate two-sample test.
• Efficient multivariate entropy estimation via \(k\)-nearest neighbour distances
• On the multivariate runs test
• Weak laws of large numbers in geometric probability
• Local nearest neighbour classification with applications to semi-supervised learning
• Robust Subspace Clustering via Thresholding
• Randomization Tests for a Multivariate Two-Sample Problem
• Two-Sample Tests for Multivariate Distributions
• Multivariate Two-Sample Tests Based on Nearest Neighbors
• On the logarithms of high-order spacings
• Permutation tests for equality of distributions in high-dimensional settings
• Multivariate Dispersion Models Generated From Gaussian Copula
• A Weighted Edge-Count Two-Sample Test for Multivariate and Object Data
• A new class of random vector entropy estimators and its applications in testing statistical hypotheses
• Gene expression distribution deconvolution in single-cell RNA sequencing
• A General Asymptotic Framework for Distribution-Free Graph-Based Two-Sample Tests
• Ensemble Subsampling for Imbalanced Multivariate Two-Sample Tests
• An Exact Distribution-Free Test Comparing Two Multivariate Distributions based on Adjacency
• New test for the multivariate two-sample problem based on the concept of minimum energy
• Nearest neighbor pattern classification
• A Distribution Free Version of the Smirnov Two Sample Test in the $p$-Variate Case
• Nonparametric independence testing via mutual information

This page was built for publication: A nearest-neighbor based nonparametric test for viral remodeling in heterogeneous single-cell proteomic data