Gene expression distribution deconvolution in single-cell RNA sequencing
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Publication:4967446
DOI10.1073/PNAS.1721085115zbMATH Open1416.62625OpenAlexW2952027905WikidataQ64913467 ScholiaQ64913467MaRDI QIDQ4967446FDOQ4967446
Authors:
Publication date: 3 July 2019
Published in: Proceedings of the National Academy of Sciences (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1073/pnas.1721085115
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Applications of statistics to biology and medical sciences; meta analysis (62P10) Protein sequences, DNA sequences (92D20)
Cited In (17)
- scSimseq: a nonparametric simulation method for single-cell RNA data
- Supervised Adversarial Alignment of Single-Cell RNA-seq Data
- Spike-and-slab Lasso biclustering
- Kinetic Foundation of the Zero-Inflated Negative Binomial Model for Single-Cell RNA Sequencing Data
- Detection of differentially expressed genes in discrete single‐cell RNA sequencing data using a hurdle model with correlated random effects
- Discussion of “Exponential-Family Embedding With Application to Cell Developmental Trajectories for Single-Cell RNA-Seq Data”
- A unified statistical framework for single cell and bulk RNA sequencing data
- A survey on normalization of single-cell RNA sequencing
- A fiducial approach to the nonparametric deconvolution problem: the discrete case
- Data denoising and post-denoising corrections in single cell RNA sequencing
- A compositional model to assess expression changes from single-cell RNA-seq data
- Assessing Markovian and delay models for single-nucleus RNA sequencing
- Analysis of a single cell RNA-seq workflow by random matrix theory methods
- A nearest-neighbor based nonparametric test for viral remodeling in heterogeneous single-cell proteomic data
- Zero-inflated quantile rank-score based test (ZIQRank) with application to scRNA-seq differential gene expression analysis
- Geometric structure guided model and algorithms for complete deconvolution of gene expression data
- scMerge leverages factor analysis, stable expression, and pseudoreplication to merge multiple single-cell RNA-seq datasets
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