Spike-and-slab Lasso biclustering

DOI10.1214/20-AOAS1385zbMATH Open1498.62122OpenAlexW3138461867MaRDI QIDQ2233147FDOQ2233147

Authors: Gemma E. Moran, Veronika Rockova, Edward I. George 

Publication date: 14 October 2021

Published in: The Annals of Applied Statistics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1214/20-aoas1385

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zbMATH Keywords

variable selectionfactor analysisBayesbiclusteringhierarchical modelingspike-and-slab Lasso

Mathematics Subject Classification ID

Bayesian inference (62F15) Classification and discrimination; cluster analysis (statistical aspects) (62H30) Applications of statistics to biology and medical sciences; meta analysis (62P10) Ridge regression; shrinkage estimators (Lasso) (62J07)

Cites Work

• Variance prior forms for high-dimensional Bayesian variable selection
• Clustering Objects on Subsets of Attributes (with Discussion)
• The horseshoe estimator for sparse signals
• Title not available (Why is that?)
• Title not available (Why is that?)
• Gene expression distribution deconvolution in single-cell RNA sequencing
• The varimax criterion for analytic rotation in factor analysis
• Bayesian estimation of sparse signals with a continuous spike-and-slab prior
• Simultaneous Variable and Covariance Selection With the Multivariate Spike-and-Slab LASSO
• Title not available (Why is that?)
• The Spike-and-Slab LASSO
• Spike-and-Slab Group Lassos for Grouped Regression and Sparse Generalized Additive Models
• Needles and straw in a haystack: posterior concentration for possibly sparse sequences
• Bayesian linear regression with sparse priors
• The maximum edge biclique problem is NP-complete
• Finding large average submatrices in high dimensional data
• Data mining in agriculture
• Computational neuroscience

Cited In (5)

• Co-clustering of spatially resolved transcriptomic data
• Comment: Regularization via Bayesian Penalty Mixing
• SSLB
• Uncovering block structures in large rectangular matrices
• Biclustering via sparse singular value decomposition

Uses Software

• LAS
• COSA
• FABIA
• breastCancerNKI
• clusterProfiler
• GitHub

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