Thresholding rules for recovering a sparse signal from microarray experiments

DOI10.1016/S0025-5564(01)00102-XzbMath0996.92022OpenAlexW2059466378WikidataQ52045600 ScholiaQ52045600MaRDI QIDQ1602575

Daniel H. Geschwind, Stanislav L. Karsten, Chiara Sabatti

Publication date: 23 June 2002

Published in: Mathematical Biosciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/s0025-5564(01)00102-x

zbMATH Keywords

minimaxthresholdingfalse discovery ratehigh dimensionmRNADNA-based microarrayssparcity

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Genetics and epigenetics (92D10)

Related Items (3)

Statistical challenges in functional genomics. (With comments and a rejoinder). ⋮ Robust semiparametric mixing for detecting differentially expressed genes in microarray experiments ⋮ A Statistical Procedure for Detecting Highly Correlated Genes with a Pre-Specified Candidate Gene in Microarray Analysis

Uses Software

• sma

Cites Work

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• Minimax risk over \(l_ p\)-balls for \(l_ q\)-error
• Adapting to unknown sparsity by controlling the false discovery rate
• Ideal spatial adaptation by wavelet shrinkage
• Gene expression analysis with the parametric bootstrap

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