Logical analysis of the budding yeast cell cycle

DOI10.1016/j.jtbi.2008.12.028zbMath1400.92169OpenAlexW2097144068WikidataQ51853271 ScholiaQ51853271MaRDI QIDQ1617723

David James Irons

Publication date: 8 November 2018

Published in: Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jtbi.2008.12.028

zbMATH Keywords

networksmodularityBoolean modelsyeast cell cycle

Mathematics Subject Classification ID

Developmental biology, pattern formation (92C15) Cell biology (92C37)

Related Items (6)

Deconstruction and dynamical robustness of regulatory networks: application to the yeast cell cycle networks ⋮ Differentiable learning of matricized DNFs and its application to Boolean networks ⋮ Synchronization of Boolean networks with time delays ⋮ Attractor analysis of asynchronous Boolean models of signal transduction networks ⋮ Symbolic coloured SCC decomposition ⋮ Unnamed Item

Cites Work

• Stochastic Petri net extension of a yeast cell cycle model
• The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in \textit{Drosophila melanogaster}
• Effects of stochasticity in models of the cell cycle: from quantized cycle times to noise-induced oscillations
• Robustness and fragility of Boolean models for genetic regulatory networks
• Superstability of the yeast cell-cycle dynamics: ensuring causality in the presence of biochemical stochasticity
• Mitotic exit in two dimensions
• Improving the efficiency of attractor cycle identification in Boolean networks
• Stochastic model of yeast cell-cycle network

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