Computation of mutual information from hidden Markov models

DOI10.1016/j.compbiolchem.2010.08.005zbMath1403.92183OpenAlexW2075763500WikidataQ46235704 ScholiaQ46235704MaRDI QIDQ1631279

Daniel Reker, Kay Hamacher, Stefan Katzenbeisser

Publication date: 6 December 2018

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2010.08.005

zbMATH Keywords

dynamicmutual informationhidden Markov modelprogrammingco-evolutionary signals

Mathematics Subject Classification ID

Problems related to evolution (92D15) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20)

Uses Software

• R
• RHmm
• Python
• Pfam
• BioPhysConnectoR

Cites Work

• Biological Sequence Analysis
• Elements of Information Theory
• On the Theory of Dynamic Programming

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