Evaluation of an S-system root-finding method for estimating parameters in a metabolic reaction model
DOI10.1016/J.MBS.2018.01.010zbMATH Open1392.92031OpenAlexW2791727550WikidataQ50057610 ScholiaQ50057610MaRDI QIDQ1644693FDOQ1644693
Authors: Michio Iwata, Atsuko Miyawaki-Kuwakado, Erika Yoshida, Soichiro Komori, Fumihide Shiraishi
Publication date: 22 June 2018
Published in: Mathematical Biosciences (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.mbs.2018.01.010
Recommendations
- Estimation of kinetic parameters in an S-system equation model for a metabolic reaction system using the Newton-Raphson method
- A simple and highly accurate numerical differentiation method for sensitivity analysis of large-scale metabolic reaction systems
- Complexity analysis and parameter estimation of dynamic metabolic systems
- Highly accurate computation of dynamic sensitivities in metabolic reaction systems by a Taylor series method
- Experimental design for parameter estimation in steady-state linear models of metabolic networks
- A reliable Taylor series-based computational method for the calculation of dynamic sensitivities in large-scale metabolic reaction systems: algorithm and software evaluation
- NEW METHOD TO ESTIMATE PARAMETERS IN A NONLINEAR SYSTEM OF PURINE NUCLEOTIDE METABOLISM
- A simplex approach to solving robust metabolic models with low-dimensional uncertainty
- Estimation of parameters in rational reaction rates of molecular biological systems via weighted least squares
- Large‐Scale Statistical Parameter Estimation in Complex Systems with an Application to Metabolic Models
Systems biology, networks (92C42) Kinetics in biochemical problems (pharmacokinetics, enzyme kinetics, etc.) (92C45)
Cites Work
- Recent developments in parameter estimation and structure identification of biochemical and genomic systems
- Numerical recipes. The art of scientific computing.
- A Spline Least Squares Method for Numerical Parameter Estimation in Differential Equations
- Using Complex Variables to Estimate Derivatives of Real Functions
- The complex-step derivative approximation
- A monomial-based method for solving systems of non-linear algebraic equations
- Solution of a two-point boundary value model of immobilized enzyme reactions, using an \(S\)-system-based root-finding method
- Estimation of kinetic parameters in an S-system equation model for a metabolic reaction system using the Newton-Raphson method
- A new parametric method to smooth time-series data of metabolites in metabolic networks
- A comparison of the monomial method and the S-system method for solving systems of algebraic equations
- An efficient method for calculation of dynamic logarithmic gains in biochemical systems theory
- Finding multiple roots of nonlinear algebraic equations using S-system methodology
- Title not available (Why is that?)
Cited In (9)
- NEW METHOD TO ESTIMATE PARAMETERS IN A NONLINEAR SYSTEM OF PURINE NUCLEOTIDE METABOLISM
- Estimation of kinetic parameters in an S-system equation model for a metabolic reaction system using the Newton-Raphson method
- A simple and highly accurate numerical differentiation method for sensitivity analysis of large-scale metabolic reaction systems
- Using an improved bee memory differential evolution algorithm for parameter estimation to simulate biochemical pathways
- Highly accurate computation of dynamic sensitivities in metabolic reaction systems by a Taylor series method
- Modeling, simulating, and parameter Fitting of biochemical kinetic experiments
- Mathematical modeling of monolignol biosynthesis in populus xylem
- Identification of microbiota dynamics using robust parameter estimation methods
- Optimizing bicoid signal extraction
This page was built for publication: Evaluation of an S-system root-finding method for estimating parameters in a metabolic reaction model
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q1644693)