An approach for reduction of false predictions in reverse engineering of gene regulatory networks

DOI10.1016/J.JTBI.2018.02.015MaRDI QIDQ1649381zbMATH OpenOpenAlexWikidataFDO

Authors Abhinandan Khan, Goutam Saha, Rajat Kumar Pal

Publication date 6 July 2018

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2018.02.015

zbMATH Keywords

false positive reductiongene regulatory networksrecurrent neural networksreverse engineeringswarm intelligence

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Systems biology, networks (92C42)

Recommendations

• A computational algebra approach to the reverse engineering of gene regulatory networks
• A mathematical program to refine gene regulatory networks
• Construction of genomic networks using mutual-information clustering and reversible-jump Markov-chain-Monte-Carlo predictor design
• Identifying gene regulatory networks from experimental data
• scientific article; zbMATH DE number 6610882

Cites work

• A New Metaheuristic Bat-Inspired Algorithm
• A powerful and efficient algorithm for numerical function optimization: artificial bee colony (ABC) algorithm

Cited in

(2)

• Constrained community-based gene regulatory network inference
• Exploiting causality in gene network reconstruction based on graph embedding

Describes a project that uses

Uses Software

• GWO
• GeneNetWeaver
• ABC

This page was built for publication: An approach for reduction of false predictions in reverse engineering of gene regulatory networks

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q1649381)