Exploiting causality in gene network reconstruction based on graph embedding

DOI10.1007/S10994-019-05861-8MaRDI QIDQ782474zbMATH OpenOpenAlexFDO

Authors Gianvito Pio, Michelangelo Ceci, Francesca Prisciandaro, Donato Malerba

Publication date 27 July 2020

Published in Machine Learning (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/s10994-019-05861-8

zbMATH Keywords

bionformaticscausalitylink predictionnetwork reconstruction

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Learning and adaptive systems in artificial intelligence (68T05) Systems biology, networks (92C42)

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Cites work

• An Algorithm for Finding a Minimal Equivalent Graph of a Digraph
• scientific article; zbMATH DE number 1493045 (Why is no real title available?)
• scientific article; zbMATH DE number 2173816 (Why is no real title available?)
• Parallel algorithms for transitive reduction for weighted graphs
• Statistical comparisons of classifiers over multiple data sets
• The Transitive Reduction of a Directed Graph

Cited in

(3)

• INLOCANDA
• Complex networks identification using Bayesian model with independent Laplace prior
• A real-time identification method of network structure in complex network systems

Describes a project that uses

Uses Software

• DeepWalk
• SynTReN
• word2vec
• ARACNE
• LINE
• node2vec
• ComiRNet

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