Reconciliation feasibility of non-binary gene trees under a duplication-loss-coalescence model

DOI10.1007/978-3-319-91938-6_2MaRDI QIDQ1660111zbMATH OpenOpenAlexFDO

Authors Ricson Cheng, Matthew Dohlen, Chen Pekker, Gabriel Quiroz, Jin-Cheng Wang, Ran Libeskind-Hadas, Yi-Chieh Wu

Publication date 15 August 2018

Full work available at URL https://doi.org/10.1007/978-3-319-91938-6_2

zbMATH Keywords

phylogeneticscoalescencereconciliationgene duplication and lossnon-binary trees

Mathematics Subject Classification ID

Problems related to evolution (92D15)

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(7)

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• A linear-time algorithm for reconciliation of non-binary gene tree and binary species tree
• Reconciliation with nonbinary gene trees revisited
• Simultaneous reconstruction of duplication episodes and gene-species mappings
• Efficient non-binary gene tree resolution with weighted reconciliation cost
• Reconciling a gene tree to a species tree under the duplication cost model
• Non-binary tree reconciliation with endosymbiotic gene transfer

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