An efficient algorithm for attribute-based subsequence matching

DOI10.1016/j.ins.2015.12.004zbMath1395.68110OpenAlexW2192716235MaRDI QIDQ1671293

Yannong Huang, Zhao Wu, Lei Yuan, Jun-Feng Qu

Publication date: 6 September 2018

Published in: Information Sciences (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.ins.2015.12.004

zbMATH Keywords

subsequence matchingattribute-based sequence

Mathematics Subject Classification ID

Database theory (68P15) Algorithms on strings (68W32)

Uses Software

• gmp
• SPADE
• MEME
• GeneRAGE

Cites Work

• Algorithms for path-constrained sequence alignment
• Motif matching using gapped patterns
• Safe MBR-transformation in similar sequence matching
• A density Chinese Remainder Theorem
• SPADE: An efficient algorithm for mining frequent sequences

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