Cited in
(95)- SWORD: Genetic algorithm tool for protein-RNA interaction motifs recognition
- Biosequence Time–Frequency Processing: Pathogen Detection and Identification
- Springer Handbook of Bio-/Neuroinformatics
- Partially local multi-way alignments
- SPADE
- AnnotationDbi
- RankProd
- Footprinter
- GenRGenS
- Spikenet
- PhyloGibbs
- Sylamer
- CODA
- Varun
- iPARTS
- Affymetrix
- GPTIPS
- tracker2
- BiGG
- BacSim
- AnnotationHub
- AnnotationForge
- SnpEff
- ANNOVAR
- CellMiner
- BEDOPS
- Cutadapt
- NGS QC Toolkit
- DREME
- ExpTreeDB
- ArchPRED
- F-Seq
- GenomicFeatures
- GMAP
- GeneSigDB
- HotKnots
- GEOmetadb
- IGV
- GSVA
- Genoviz
- GeneHug-GEPIS
- GenomeGraphs
- GSNAP
- Bambino
- BioOptimizer
- My5C
- eXiT*CBR
- OrganismDbi
- PHAT
- Genomatix
- Oncomine
- NGS-QC
- ProbKnot
- iMembrane
- GAME
- jCOLIBRI
- GAMES
- LOOPER
- pyDNase
- MacRad
- PROPER
- MaSTerClass
- MEDELLER
- Rtracklayer
- Rsubread
- nocoRNAc
- GeoSVM
- KDDONTO
- STAMP
- TurboFold
- SSAHA
- VarSifter
- VariantTools
- VariantAnnotation
- UniHI
- SWORD
- WordSpy
- MergeAlign
- ARGO
- SWIFT
- Strelka
- CompariMotif
- MotifVoter
- fREDUCE
- MotifMiner
- MUSA
- SPACER
- WebMOTIFS
- GeneRAGE
- TEIRESIAS
- A model for sequential evolution of ligands by exponential enrichment (SELEX) data
- Phylogenetic footprinting and consistent sets of local aligments
- Filtering degenerate patterns with application to protein sequence analysis
- Statistical genomics. Methods and protocols
- An efficient algorithm for attribute-based subsequence matching
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