Modelling the impact of acute infection dynamics on the accumulation of HIV-1 mutations

DOI10.1016/J.JTBI.2011.03.011MaRDI QIDQ1783480zbMATH OpenOpenAlexWikidataFDO

Authors Tinevimbo Shiri, Alex Welte

Publication date 21 September 2018

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2011.03.011

zbMATH Keywords

branching processvaccinediversityPrEPeffective reproductive number

Mathematics Subject Classification ID

Medical epidemiology (92C60) Epidemiology (92D30) Applications of branching processes (60J85)

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Cites work

• Evolutionary dynamics of invasion and escape
• Exact sampling formulas for multi-type Galton-Watson processes
• Joint estimation of the basic reproduction number and generation time parameters for infectious disease outbreaks
• Modeling sequence evolution in acute HIV-1 infection
• Probability of resistance evolution for exponentially growing virus in the host

Cited in

(5)

• Early HIV infection predictions: role of viral replication errors
• Combining Cross‐Sectional and Prospective Data Methods to Improve Transition Parameter Estimation for Characterizing the Accumulation of HIV‐1 Drug Resistance Mutations
• Computation of random time-shift distributions for stochastic population models
• Sampling HIV intrahost genealogies based on a model of acute stage CTL response
• Mathematical modelling of mutant accumulation kinetics in a cloned viral population

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