Diffusion-limited reactions in nanoscale electronics
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Publication:1985698
Biochemistry, molecular biology (92C40) Numerical quadrature and cubature formulas (65D32) Asymptotic approximations, asymptotic expansions (steepest descent, etc.) (41A60) Integro-partial differential equations (45K05) Numerical methods for integral equations (65R20) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Integro-partial differential equations (35R09) Method of lines for initial value and initial-boundary value problems involving PDEs (65M20)
Abstract: A partial differential equation (PDE) was developed to describe time-dependent ligand-receptor interactions for applications in biosensing using field effect transistors (FET). The model describes biochemical interactions at the sensor surface (or biochemical gate) located at the bottom of a solution-well, which result in a time-dependent change in the FET conductance. It was shown that one can exploit the disparate length scales of the solution-well and biochemical gate to reduce the coupled PDE model to a single nonlinear integrodifferential equation (IDE) that describes the concentration of reacting species. Although this equation has a convolution integral with a singular kernel, a numerical approximation was constructed by applying the method of lines. The need for specialized quadrature techniques was obviated and numerical evidence strongly suggests that this method achieves first-order accuracy. Results reveal a depletion region on the biochemical gate, which non-uniformly alters the surface potential of the semiconductor.
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