Tabu search for the RNA partial degradation problem

DOI10.1515/AMCS-2017-0028MaRDI QIDQ2011915zbMATH OpenOpenAlexWikidataFDO

Authors Agnieszka Rybarczyk, Alain Hertz, Marta Kasprzak, Jacek Blazewicz

Publication date 27 July 2017

Published in International Journal of Applied Mathematics and Computer Science (Search for Journal in Brave)

Copyright license Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International

Full work available at URL https://doi.org/10.1515/amcs-2017-0028

zbMATH Keywords

bioinformaticsRNA degradationtabu search

Mathematics Subject Classification ID

Combinatorial optimization (90C27) Biochemistry, molecular biology (92C40)

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Cites work

• A support vector machine with the tabu search algorithm for freeway incident detection
• Automatic parametric fault detection in complex analog systems based on a method of minimum node selection
• Building the library of RNA 3D nucleotide conformations using the clustering approach
• Complexity issues in computational biology
• Evolutionary approaches to DNA sequencing with errors
• Genetic algorithms and tabu search: Hybrids for optimization
• scientific article; zbMATH DE number 3639144 (Why is no real title available?)
• scientific article; zbMATH DE number 1062113 (Why is no real title available?)
• Modelling DNA and RNA secondary structures using matrix insertion-deletion systems
• Tabu search for DNA sequencing with false negatives and false positives

Cited in

(1)

• New models and algorithms for RNA pseudoknot order assignment

Describes a project that uses

Uses Software

• Tabu search

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