Non-invasive inference of thrombus material properties with physics-informed neural networks
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Publication:2022055
DOI10.1016/J.CMA.2020.113603zbMATH Open1506.74215arXiv2005.11380OpenAlexW3028009715WikidataQ104795330 ScholiaQ104795330MaRDI QIDQ2022055FDOQ2022055
George Em Karniadakis, X. Zheng, Minglang Yin, Jay D. Humphrey
Publication date: 27 April 2021
Published in: Computer Methods in Applied Mechanics and Engineering (Search for Journal in Brave)
Abstract: We employ physics-informed neural networks (PINNs) to infer properties of biological materials using synthetic data. In particular, we successfully apply PINNs on inferring the thrombus permeability and visco-elastic modulus from thrombus deformation data, which can be described by the fourth-order Cahn-Hilliard and Navier-Stokes Equations. In PINNs, the partial differential equations are encoded into the loss function, where partial derivatives can be obtained through automatic differentiation (AD). In addition, to tackling the challenge of calculating the fourth-order derivative in the Cahn-Hilliard equation with AD, we introduce an auxiliary network along with the main neural network to approximate the second-derivative of the energy potential term. Our model can predict simultaneously unknown parameters and velocity, pressure, and deformation gradient fields by merely training with partial information among all data, i.e., phase-field and pressure measurements, and is also highly flexible in sampling within the spatio-temporal domain for data acquisition. We validate our model by numerical solutions from the spectral/ extit{hp} element method (SEM) and demonstrate its robustness by training it with noisy measurements. Our results show that PINNs can accurately infer the material properties with noisy synthetic data, and thus they have great potential for inferring these properties from experimental multi-modality and multi-fidelity data.
Full work available at URL: https://arxiv.org/abs/2005.11380
inverse problemphase field modelphysics-informed neural networkscomputational fluids dynamicsviscoelastic porous material
Cites Work
- Title not available (Why is that?)
- fPINNs: Fractional Physics-Informed Neural Networks
- Parameter Estimation of Partial Differential Equation Models
- Parameter Estimation for Differential Equations: a Generalized Smoothing Approach
- Parameter Estimation for Differential Equation Models Using a Framework of Measurement Error in Regression Models
- Discovering governing equations from data by sparse identification of nonlinear dynamical systems
- State and parameter estimation in 1-D hyperbolic PDEs based on an adjoint method
- On hydrodynamics of viscoelastic fluids
- Goal-oriented inference: approach, linear theory, and application to advection diffusion
- Sensitivity analysis and design optimization of three-dimensional non-linear aeroelastic systems by the adjoint method
- Bayesian solution uncertainty quantification for differential equations
- A computational model of the biochemomechanics of an evolving occlusive thrombus
- Physics-informed neural networks: a deep learning framework for solving forward and inverse problems involving nonlinear partial differential equations
- Quantifying total uncertainty in physics-informed neural networks for solving forward and inverse stochastic problems
- Deep Convolutional Neural Network for Inverse Problems in Imaging
- Physics-informed neural networks for high-speed flows
- Hidden fluid mechanics: Learning velocity and pressure fields from flow visualizations
- Machine learning in cardiovascular flows modeling: predicting arterial blood pressure from non-invasive 4D flow MRI data using physics-informed neural networks
- Variational system identification of the partial differential equations governing the physics of pattern-formation: inference under varying fidelity and noise
- Conservative physics-informed neural networks on discrete domains for conservation laws: applications to forward and inverse problems
- A composite neural network that learns from multi-fidelity data: application to function approximation and inverse PDE problems
Cited In (22)
- Interfacing finite elements with deep neural operators for fast multiscale modeling of mechanics problems
- Variable separated physics-informed neural networks based on adaptive weighted loss functions for blood flow model
- A physics-informed variational DeepONet for predicting crack path in quasi-brittle materials
- Deep learning of free boundary and Stefan problems
- Hidden physics model for parameter estimation of elastic wave equations
- On the order of derivation in the training of physics-informed neural networks: case studies for non-uniform beam structures
- On physics-informed neural networks training for coupled hydro-poromechanical problems
- Compatible Energy Dissipation of the Variable-Step \({\boldsymbol{L1}}\) Scheme for the Space-Time Fractional Cahn-Hilliard Equation
- A super-real-time three-dimension computing method of digital twins in space nuclear power
- When Do Extended Physics-Informed Neural Networks (XPINNs) Improve Generalization?
- ReF-nets: physics-informed neural network for Reynolds equation of gas bearing
- A-PINN: auxiliary physics informed neural networks for forward and inverse problems of nonlinear integro-differential equations
- Identification of settling velocity with physics informed neural networks for sediment laden flows
- Data driven modeling of interfacial traction-separation relations using a thermodynamically consistent neural network
- Physics-informed radial basis network (PIRBN): a local approximating neural network for solving nonlinear partial differential equations
- PhyCRNet: physics-informed convolutional-recurrent network for solving spatiotemporal PDEs
- Local well-posedness of a three-dimensional phase-field model for thrombus and blood flow
- MFLP-PINN: a physics-informed neural network for multiaxial fatigue life prediction
- Combining physics-informed graph neural network and finite difference for solving forward and inverse spatiotemporal PDEs
- CENN: conservative energy method based on neural networks with subdomains for solving variational problems involving heterogeneous and complex geometries
- Parallel physics-informed neural networks via domain decomposition
- AI in computational mechanics and engineering sciences
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