Deep sequencing data analysis

DOI10.1007/978-1-0716-1103-6MaRDI QIDQ2034478zbMATH OpenOpenAlexFDO

Authors

Publication date 22 June 2021

Published in Methods in Molecular Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-1-0716-1103-6

zbMATH Keywords

deep learningcopy number variationsingle nucleotide polymorphism (SNP)clonal evolutioncancer classificationcommunity detection algorithmsintra-tumour heterogeneity16S amplicon sequencingATACseqcausal variantschromatin landscapede novo mutationsdeep sequencingforensic analysisimputation of untyped variantsMendelian disordermicrobiome sequencingmulti-region sequence analysisnon-invasive prenatal diagnosisRNA-seq experimental designsingle cell microRNA analysissingle cell transcriptome profilingsmall universal k-mer hitting setwhole-metagenome shotgun sequencing

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Protein sequences, DNA sequences (92D20) Collections of articles of miscellaneous specific interest (00B15) Proceedings, conferences, collections, etc. pertaining to biology (92-06)

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Cited in

(5)

• Genome sequencing technology and algorithms.
• Computational exome and genome analysis
• Computational genomics with R. With the assistance of Verdan Franke, Bora Uyar and Jonathan Ronen
• Statistical analysis of next generation sequencing data
• Next-generation sequencing. Current technologies and applications

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