Conservative finite volume method on deforming geometries: the case of protein aggregation in dividing yeast cells

DOI10.1016/j.jcp.2021.110755OpenAlexW3205585868WikidataQ114163406 ScholiaQ114163406MaRDI QIDQ2134533

Maxime Theillard, A. Ali Heydari, Suzanne S. Sindi

Publication date: 3 May 2022

Published in: Journal of Computational Physics (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.jcp.2021.110755

zbMATH Keywords

level setfinite volumeconservativeprotein aggregationoctreedividing cell

Mathematics Subject Classification ID

Basic methods in fluid mechanics (76Mxx) Numerical methods for partial differential equations, initial value and time-dependent initial-boundary value problems (65Mxx) Physiological, cellular and medical topics (92Cxx)

Related Items (1)

Three-dimensional sharp and conservative VOF method for the simulation of binary solidification

Uses Software

• ParaView

Cites Work

• Unnamed Item
• Unnamed Item
• A stable projection method for the incompressible Navier-Stokes equations on arbitrary geometries and adaptive quad/octrees
• A mathematical analysis of physiological and morphological aspects of wound closure
• A sharp interface method for incompressible two-phase flows
• A second order accurate level set method on non-graded adaptive Cartesian grids
• A partial differential equation approach to multidimensional extrapolation.
• Direct arbitrary-Lagrangian-Eulerian finite volume schemes on moving nonconforming unstructured meshes
• Three-dimensional multispecies nonlinear tumor growth. I: Model and numerical method
• A volume-preserving reference map method for the level set representation
• Sharp numerical simulation of incompressible two-phase flows
• A coupled level-set and reference map method for interface representation with applications to two-phase flows simulation
• Computational mean-field modeling of confined active fluids
• A study in nucleated polymerization models of protein aggregation
• A sharp computational method for the simulation of the solidification of binary alloys
• A multigrid method on non-graded adaptive octree and quadtree Cartesian grids
• A second-order sharp numerical method for solving the linear elasticity equations on irregular domains and adaptive grids -- application to shape optimization
• Geometric integration over irregular domains with application to level-set methods
• An improved geometry-aware curvature discretization for level set methods: Application to tumor growth
• An Adaptive, Finite Difference Solver for the Nonlinear Poisson-Boltzmann Equation with Applications to Biomolecular Computations

This page was built for publication: Conservative finite volume method on deforming geometries: the case of protein aggregation in dividing yeast cells