BioFVM-X: an MPI+OpenMP 3-D simulator for biological systems

DOI10.1007/978-3-030-85633-5_18zbMATH Open1491.92065OpenAlexW3200584885MaRDI QIDQ2142129FDOQ2142129

Authors: Gaurav Saxena, Miguel Ponce-de-Leon, Arnau Montagud, David Vicente Dorca, Alfonso Valencia 

Publication date: 25 May 2022

Full work available at URL: https://doi.org/10.1007/978-3-030-85633-5_18

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zbMATH Keywords

MPIparallelizationmulti-scale modelingOpenMPshared-memorydistributed-memorylattice-free modeling

Mathematics Subject Classification ID

Systems biology, networks (92C42) Software, source code, etc. for problems pertaining to biology (92-04) Pathology, pathophysiology (92C32)

Cites Work

• Title not available (Why is that?)
• An Introduction to Numerical Analysis
• A Multigrid Tutorial, Second Edition
• Numerical methods for partial differential equations. Finite difference and finite volume methods
• PaScaL\_TDMA: a library of parallel and scalable solvers for massive tridiagonal systems

Cited In (2)

• BioFVM-X
• Title not available (Why is that?)

Uses Software

• Chaste
• hypre
• SPRNG
• PETSc
• Chombo
• Global Arrays
• Zoltan
• Intel TBB
• PhysiCell
• Biocellion
• PaScaL_TDMA
• BioFVM

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